Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm24443-201ENSMUST00000157242 132 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm22560-201ENSMUST00000157332 120 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm26414-201ENSMUST00000157674 269 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm24191-201ENSMUST00000157977 122 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm24314-201ENSMUST00000158274 123 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm22668-201ENSMUST00000158716 260 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm20543-201ENSMUST00000174200 726 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm21737-201ENSMUST00000178112 664 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm21815-201ENSMUST00000178213 664 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm20874-201ENSMUST00000178356 663 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm21744-201ENSMUST00000178403 662 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm20901-201ENSMUST00000180177 664 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm29429-201ENSMUST00000187071 121 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm21647-201ENSMUST00000189755 664 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm45522-201ENSMUST00000210784 166 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm14843-201ENSMUST00000119596 212 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm15272-201ENSMUST00000120865 233 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm25292-201ENSMUST00000122797 322 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm23599-201ENSMUST00000157261 251 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm24577-201ENSMUST00000158580 63 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm18520-201ENSMUST00000174783 658 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm25243-201ENSMUST00000174912 207 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm24086-201ENSMUST00000175171 98 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm20698-201ENSMUST00000175657 233 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm25360-201ENSMUST00000178786 191 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm23862-201ENSMUST00000180342 94 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm28090-201ENSMUST00000189458 664 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm28169-201ENSMUST00000190342 345 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm45730-201ENSMUST00000212560 395 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Gm26056-201ENSMUST00000083043 104 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 AF357428-201ENSMUST00000083815 69 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
H2afb1S4R1E0 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
H2afb1S4R1E0 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Mir673-201ENSMUST00000102361 91 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm15936-201ENSMUST00000118706 460 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm14940-201ENSMUST00000119309 495 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm7071-201ENSMUST00000120458 462 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm13339-201ENSMUST00000120651 510 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm12155-201ENSMUST00000121267 160 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm24724-201ENSMUST00000158230 107 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm24499-201ENSMUST00000158446 104 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm16232-201ENSMUST00000162856 167 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm17072-201ENSMUST00000166673 658 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm26180-201ENSMUST00000179942 107 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm38041-201ENSMUST00000194445 661 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm43976-201ENSMUST00000203637 235 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm44687-201ENSMUST00000204975 235 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm45513-201ENSMUST00000210228 376 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm19326-201ENSMUST00000219818 326 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Mir10a-201ENSMUST00000083585 110 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm24765-201ENSMUST00000083691 103 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm23042-201ENSMUST00000083866 101 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm25257-201ENSMUST00000083907 110 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Mir452-201ENSMUST00000093629 85 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
H2afb1S4R1E0 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms