Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm19032-201ENSMUST00000208584 592 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm45382-201ENSMUST00000210607 151 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm26263-201ENSMUST00000083281 164 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm25317-201ENSMUST00000116824 129 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm12636-201ENSMUST00000117395 624 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm23181-201ENSMUST00000158685 110 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm23619-201ENSMUST00000178411 94 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm25474-201ENSMUST00000179052 94 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm22047-201ENSMUST00000179176 94 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm11395-201ENSMUST00000181011 499 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Mir7028-201ENSMUST00000185016 64 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm18692-201ENSMUST00000193047 511 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm8023-201ENSMUST00000195298 903 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm43004-201ENSMUST00000201872 703 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm45232-201ENSMUST00000207811 162 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Gm381-201ENSMUST00000117443 2037 ntBASIC1.89□□□□□ -2.11
Trem1Q9JKE2 Mir687-201ENSMUST00000102166 89 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm13885-201ENSMUST00000117569 187 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm13756-201ENSMUST00000117618 222 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm24937-201ENSMUST00000122597 134 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm22143-201ENSMUST00000157401 203 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Mir1949-201ENSMUST00000157434 141 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm23196-201ENSMUST00000158806 107 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm26157-201ENSMUST00000158974 126 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm17085-201ENSMUST00000165425 502 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Mir7578-201ENSMUST00000183455 82 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm28745-201ENSMUST00000190069 305 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm9377-201ENSMUST00000207227 623 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm45252-201ENSMUST00000211579 397 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 AF357428-201ENSMUST00000083815 69 ntBASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trem1Q9JKE2 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm22678-201ENSMUST00000116974 101 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm15659-201ENSMUST00000118881 341 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm14551-201ENSMUST00000120802 256 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm12926-201ENSMUST00000121158 409 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm12443-201ENSMUST00000122308 323 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm26027-201ENSMUST00000122725 268 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm25994-201ENSMUST00000175392 101 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm27878-201ENSMUST00000184000 106 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm18356-201ENSMUST00000185677 623 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm37377-201ENSMUST00000191733 304 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm29848-201ENSMUST00000203107 295 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Gm17991-201ENSMUST00000208139 297 ntBASIC1.87□□□□□ -2.11
Trem1Q9JKE2 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm15175-201ENSMUST00000117629 132 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm22277-201ENSMUST00000157204 277 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm25454-201ENSMUST00000157947 315 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm22076-201ENSMUST00000158601 84 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm25490-201ENSMUST00000158734 130 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm26005-201ENSMUST00000158802 134 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm15914-201ENSMUST00000161922 309 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm16561-201ENSMUST00000163001 192 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm5277-201ENSMUST00000164923 556 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Mir3086-201ENSMUST00000175072 87 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Gm25020-201ENSMUST00000178071 107 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Mir6399-201ENSMUST00000184050 84 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.86□□□□□ -2.11
Trem1Q9JKE2 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trem1Q9JKE2 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Trem1Q9JKE2 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.85□□□□□ -2.11
Trem1Q9JKE2 Gm13378-201ENSMUST00000117483 336 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms