Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm26270-201ENSMUST00000178690 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm23313-201ENSMUST00000178931 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm23089-201ENSMUST00000178947 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm24153-201ENSMUST00000179280 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm25597-201ENSMUST00000179388 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm25816-201ENSMUST00000179764 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm26188-201ENSMUST00000179963 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm26433-201ENSMUST00000180227 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm22128-201ENSMUST00000180346 94 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm37568-201ENSMUST00000191755 364 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm18956-201ENSMUST00000192857 480 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC0.36□□□□□ -2.35
Smco4Q9JIS3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm11572-201ENSMUST00000119164 120 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm24086-201ENSMUST00000175171 98 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm45439-201ENSMUST00000211723 359 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm18188-201ENSMUST00000219386 478 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.35□□□□□ -2.35
Smco4Q9JIS3 Gm23836-201ENSMUST00000104434 129 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm13457-201ENSMUST00000117885 267 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm15162-201ENSMUST00000119325 283 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm15214-201ENSMUST00000122155 470 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm22164-201ENSMUST00000158413 106 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.36
Smco4Q9JIS3 Gm23951-201ENSMUST00000104029 132 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm14879-201ENSMUST00000117308 507 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm22755-201ENSMUST00000157143 100 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm24908-201ENSMUST00000157294 127 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm25220-201ENSMUST00000157546 95 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Mir3103-201ENSMUST00000175474 67 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm27028-201ENSMUST00000182303 399 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm27878-201ENSMUST00000184000 106 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Mir6374-201ENSMUST00000184003 107 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Mir7675-201ENSMUST00000184262 58 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm43007-201ENSMUST00000197618 291 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Olfr1285-201ENSMUST00000208523 903 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm19232-201ENSMUST00000211621 652 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.33□□□□□ -2.36
Smco4Q9JIS3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Gm24601-201ENSMUST00000157970 143 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Gm23355-201ENSMUST00000177614 107 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Gm19147-201ENSMUST00000199622 652 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Gm19649-201ENSMUST00000201126 822 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Gm23721-201ENSMUST00000083005 107 ntBASIC0.32□□□□□ -2.36
Smco4Q9JIS3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm26256-201ENSMUST00000122499 186 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm37771-201ENSMUST00000193121 265 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm42807-201ENSMUST00000200141 329 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm44830-201ENSMUST00000207667 584 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.31□□□□□ -2.36
Smco4Q9JIS3 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Ear14-201ENSMUST00000049559 468 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.31□□□□□ -2.36
Smco4Q9JIS3 Gm22750-201ENSMUST00000102076 103 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm22233-201ENSMUST00000157464 114 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm22382-201ENSMUST00000158185 130 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm25868-201ENSMUST00000158253 114 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms