Protein–RNA interactions for Protein: Q9ES63

Usp29, Ubiquitin carboxyl-terminal hydrolase 29, mousemouse

Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp29Q9ES63 Gm22798-201ENSMUST00000083992 107 ntBASIC3.39□□□□□ -1.87
Usp29Q9ES63 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
Usp29Q9ES63 Gm26427-201ENSMUST00000093648 107 ntBASIC3.39□□□□□ -1.87
Usp29Q9ES63 Gm22886-201ENSMUST00000093714 107 ntBASIC3.39□□□□□ -1.87
Usp29Q9ES63 Gm22170-201ENSMUST00000097247 107 ntBASIC3.39□□□□□ -1.87
Usp29Q9ES63 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp29Q9ES63 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp29Q9ES63 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp29Q9ES63 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp29Q9ES63 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm14973-201ENSMUST00000117248 255 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm16242-201ENSMUST00000117741 334 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm15844-201ENSMUST00000118016 576 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm6956-201ENSMUST00000134724 546 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm24847-201ENSMUST00000158032 108 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm17062-201ENSMUST00000166987 461 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Mir8096-201ENSMUST00000184526 127 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm27520-201ENSMUST00000184872 81 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm7329-201ENSMUST00000185915 210 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm28314-201ENSMUST00000191276 345 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm43529-201ENSMUST00000199178 412 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm44083-201ENSMUST00000203114 337 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm7948-201ENSMUST00000212607 844 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm45815-201ENSMUST00000220241 146 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usp29Q9ES63 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm13903-201ENSMUST00000120945 193 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm22957-201ENSMUST00000122511 123 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm14562-201ENSMUST00000129885 543 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm14389-201ENSMUST00000140453 241 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm16358-201ENSMUST00000146046 210 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm24213-201ENSMUST00000158255 258 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm22521-201ENSMUST00000158272 134 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm23053-201ENSMUST00000175136 96 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm34073-201ENSMUST00000195736 212 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm43217-201ENSMUST00000199513 367 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.37□□□□□ -1.87
Usp29Q9ES63 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.37□□□□□ -1.87
Usp29Q9ES63 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm24127-201ENSMUST00000104110 130 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm12235-201ENSMUST00000118596 170 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm13518-201ENSMUST00000120018 233 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm14841-201ENSMUST00000121067 758 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm14821-201ENSMUST00000121975 435 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm23956-201ENSMUST00000157211 119 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm22843-201ENSMUST00000157710 134 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm23557-201ENSMUST00000157820 138 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm23779-201ENSMUST00000157938 64 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm22766-201ENSMUST00000158372 99 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm17186-201ENSMUST00000171742 456 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm32033-201ENSMUST00000193483 339 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm25203-202ENSMUST00000200458 216 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm44964-201ENSMUST00000207011 273 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm9712-201ENSMUST00000210842 311 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm25203-201ENSMUST00000082842 215 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.36□□□□□ -1.87
Usp29Q9ES63 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Usp29Q9ES63 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm15936-201ENSMUST00000118706 460 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm22073-201ENSMUST00000122668 189 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm8121-201ENSMUST00000153583 499 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm22328-201ENSMUST00000158074 112 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm27510-201ENSMUST00000158214 64 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm24730-201ENSMUST00000158228 117 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usp29Q9ES63 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Usp29Q9ES63 Mir5624-201ENSMUST00000176635 61 ntBASIC3.35□□□□□ -1.87
Usp29Q9ES63 Gm29602-201ENSMUST00000186887 442 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms