Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm3788-201ENSMUST00000119949 136 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm26149-201ENSMUST00000157432 108 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm3027-201ENSMUST00000167579 451 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm44446-201ENSMUST00000204864 255 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm44519-201ENSMUST00000206486 122 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Gm23096-201ENSMUST00000083447 107 ntBASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trim54Q9ERP3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm11065-201ENSMUST00000111462 228 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm7164-201ENSMUST00000117503 450 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm11471-201ENSMUST00000121824 198 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm10105-201ENSMUST00000184601 270 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm19202-201ENSMUST00000198096 808 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm19252-201ENSMUST00000204705 305 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm7240-201ENSMUST00000220769 664 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm22154-201ENSMUST00000083844 131 ntBASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim54Q9ERP3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm25339-201ENSMUST00000157458 232 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm28000-201ENSMUST00000184380 85 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Mir195b-201ENSMUST00000184814 97 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm37281-201ENSMUST00000192412 439 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm37054-201ENSMUST00000193481 543 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm42925-201ENSMUST00000197359 285 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm6012-201ENSMUST00000210821 730 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm23454-201ENSMUST00000083332 133 ntBASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim54Q9ERP3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm7853-201ENSMUST00000100708 478 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Mir1195-201ENSMUST00000116818 98 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm14877-201ENSMUST00000119803 478 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm25982-201ENSMUST00000157920 101 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm26180-201ENSMUST00000179942 107 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm43284-201ENSMUST00000200103 253 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm23404-201ENSMUST00000082543 97 ntBASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim54Q9ERP3 Gm12765-201ENSMUST00000117273 615 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm14670-201ENSMUST00000117327 337 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm14551-201ENSMUST00000120802 256 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm13153-201ENSMUST00000120969 637 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm17062-201ENSMUST00000166987 461 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm17919-201ENSMUST00000173344 312 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm23660-201ENSMUST00000178362 79 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm24088-201ENSMUST00000179100 79 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm43238-201ENSMUST00000196463 359 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm25079-201ENSMUST00000082529 203 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.15□□□□□ -1.91
Trim54Q9ERP3 Snord98-201ENSMUST00000116819 65 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm5937-201ENSMUST00000119715 643 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm14269-201ENSMUST00000120455 306 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm24596-201ENSMUST00000122504 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms