Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm18453-201ENSMUST00000208000 626 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm17911-201ENSMUST00000210806 877 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm22683-201ENSMUST00000082854 137 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Lima1Q9ERG0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Mir466n-201ENSMUST00000104798 94 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm11352-201ENSMUST00000119264 517 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm12044-201ENSMUST00000120335 213 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm23034-201ENSMUST00000158001 147 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm22611-201ENSMUST00000158288 150 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm22527-201ENSMUST00000158816 106 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm17154-201ENSMUST00000165748 431 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm17062-201ENSMUST00000166987 461 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm24137-201ENSMUST00000180055 79 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm22391-201ENSMUST00000180356 79 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Mir6997-201ENSMUST00000184313 71 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Mir7226-201ENSMUST00000184953 60 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm28666-201ENSMUST00000186649 274 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm32175-201ENSMUST00000193641 346 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm22974-201ENSMUST00000083301 103 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.68□□□□□ -2.14
Lima1Q9ERG0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm22779-201ENSMUST00000104085 107 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm6444-201ENSMUST00000119611 458 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Mir6351-201ENSMUST00000183826 99 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm28000-201ENSMUST00000184380 85 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm43652-201ENSMUST00000196219 675 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm44881-201ENSMUST00000205425 367 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm10298-201ENSMUST00000074801 265 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm22443-201ENSMUST00000082890 107 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm23645-201ENSMUST00000083228 108 ntBASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Lima1Q9ERG0 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm22936-201ENSMUST00000103955 126 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm22496-201ENSMUST00000104493 88 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm13355-201ENSMUST00000117996 317 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm23538-201ENSMUST00000157535 101 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm21744-201ENSMUST00000178403 662 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm25175-201ENSMUST00000178712 79 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm21171-201ENSMUST00000180048 673 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm29413-201ENSMUST00000186019 880 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm28700-201ENSMUST00000187614 579 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm29639-201ENSMUST00000188375 580 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm28843-201ENSMUST00000189198 678 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm29546-201ENSMUST00000191171 678 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Mir703-201ENSMUST00000197105 109 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm44961-201ENSMUST00000207450 196 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm25257-201ENSMUST00000083907 110 ntBASIC1.66□□□□□ -2.14
Lima1Q9ERG0 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Lima1Q9ERG0 Gm23109-201ENSMUST00000116867 126 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm15110-201ENSMUST00000117545 881 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm2020-201ENSMUST00000145242 579 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm24858-201ENSMUST00000158058 323 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Snord11-201ENSMUST00000158468 84 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Mir6382-201ENSMUST00000184055 110 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm28058-201ENSMUST00000186421 264 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm19891-201ENSMUST00000189771 303 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms