Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC0.37□□□□□ -2.35
Hmgn3Q9DCB1 AC153881.3-201ENSMUST00000218494 1561 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm24715-201ENSMUST00000102377 95 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm13678-201ENSMUST00000118926 340 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm24229-201ENSMUST00000158830 118 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm23340-201ENSMUST00000158955 123 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Mir3086-201ENSMUST00000175072 87 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm44403-201ENSMUST00000198554 129 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm45577-201ENSMUST00000210206 2287 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.36□□□□□ -2.35
Hmgn3Q9DCB1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm14591-201ENSMUST00000120407 518 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm24959-201ENSMUST00000157924 146 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm23312-201ENSMUST00000158774 102 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm16147-201ENSMUST00000162143 373 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Mir6383-201ENSMUST00000184545 116 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm25820-201ENSMUST00000198589 127 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm10264-201ENSMUST00000220589 429 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm23377-201ENSMUST00000082943 126 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
Hmgn3Q9DCB1 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.34□□□□□ -2.35
Hmgn3Q9DCB1 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.34□□□□□ -2.35
Hmgn3Q9DCB1 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Gm23170-201ENSMUST00000157158 106 ntBASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Gm27520-201ENSMUST00000184872 81 ntBASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Gm19147-201ENSMUST00000199622 652 ntBASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 AC113031.2-201ENSMUST00000226132 579 ntBASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Hmgn3Q9DCB1 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm23672-201ENSMUST00000157471 107 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm24925-201ENSMUST00000178157 107 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm28404-201ENSMUST00000190242 453 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm18268-201ENSMUST00000208445 943 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.33□□□□□ -2.36
Hmgn3Q9DCB1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm23933-201ENSMUST00000178405 79 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm27660-201ENSMUST00000184028 208 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm37399-201ENSMUST00000195224 416 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm42570-201ENSMUST00000195937 292 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm45146-201ENSMUST00000207108 221 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Hmgn3Q9DCB1 Gm14932-201ENSMUST00000117112 453 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm13046-201ENSMUST00000117391 501 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm13239-201ENSMUST00000119920 637 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm37979-201ENSMUST00000193065 712 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.31□□□□□ -2.36
Hmgn3Q9DCB1 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm22478-201ENSMUST00000122570 154 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm23435-201ENSMUST00000157183 156 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm26358-201ENSMUST00000158215 97 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm24837-201ENSMUST00000158683 81 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm29647-201ENSMUST00000188795 666 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Npn2-202ENSMUST00000189275 235 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm28504-201ENSMUST00000190977 666 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm37568-201ENSMUST00000191755 364 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm29740-201ENSMUST00000193182 655 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm19457-201ENSMUST00000200995 448 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm43979-201ENSMUST00000203179 475 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm45071-201ENSMUST00000205353 571 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm45023-201ENSMUST00000207951 379 ntBASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Hmgn3Q9DCB1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.29□□□□□ -2.36
Hmgn3Q9DCB1 Snord71-201ENSMUST00000104361 85 ntBASIC0.29□□□□□ -2.36
Hmgn3Q9DCB1 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
Hmgn3Q9DCB1 Gm13356-201ENSMUST00000121678 335 ntBASIC0.29□□□□□ -2.36
Hmgn3Q9DCB1 Gm25976-201ENSMUST00000158695 130 ntBASIC0.29□□□□□ -2.36
Hmgn3Q9DCB1 Gm22131-201ENSMUST00000178415 94 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms