Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx56Q9D0R4 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm14687-201ENSMUST00000120206 363 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm26099-201ENSMUST00000157248 109 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm24601-201ENSMUST00000157970 143 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm24878-201ENSMUST00000158782 104 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm7953-201ENSMUST00000168278 469 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Mir5127-201ENSMUST00000175295 71 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm25671-201ENSMUST00000178612 105 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm23307-201ENSMUST00000179167 105 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm23793-201ENSMUST00000179396 117 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm25286-201ENSMUST00000179790 105 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm29229-201ENSMUST00000188874 323 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm20885-201ENSMUST00000190192 654 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm37097-201ENSMUST00000193676 336 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm42621-201ENSMUST00000198114 275 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm45673-201ENSMUST00000210293 358 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm39147-201ENSMUST00000211376 465 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm25929-201ENSMUST00000082784 107 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm23247-201ENSMUST00000083373 107 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Mir27a-201ENSMUST00000083510 87 ntBASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ddx56Q9D0R4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm24582-201ENSMUST00000103967 103 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm24126-201ENSMUST00000104111 106 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm25420-201ENSMUST00000104216 127 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm11414-201ENSMUST00000121795 263 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm23829-201ENSMUST00000157392 270 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm23641-201ENSMUST00000157857 101 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm24819-201ENSMUST00000175094 166 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Spin2g-201ENSMUST00000178425 687 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm22910-201ENSMUST00000178568 132 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm18486-201ENSMUST00000184040 298 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm45245-201ENSMUST00000210082 376 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm24623-201ENSMUST00000082616 194 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Gm25651-201ENSMUST00000083782 119 ntBASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ddx56Q9D0R4 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm26075-201ENSMUST00000104062 121 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm24172-201ENSMUST00000104127 117 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm22021-201ENSMUST00000104353 107 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm23588-201ENSMUST00000157659 99 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Mir1934-201ENSMUST00000158127 83 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm22085-201ENSMUST00000158344 110 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Mir6914-201ENSMUST00000184999 69 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm2710-201ENSMUST00000073196 603 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.54□□□□□ -1.84
Ddx56Q9D0R4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm14581-201ENSMUST00000121726 198 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm22073-201ENSMUST00000122668 189 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm24505-201ENSMUST00000157682 126 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm17966-201ENSMUST00000193453 594 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm45815-201ENSMUST00000220241 146 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 AF357341-201ENSMUST00000083088 75 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm26164-201ENSMUST00000083793 104 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.53□□□□□ -1.84
Ddx56Q9D0R4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
Ddx56Q9D0R4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm23530-201ENSMUST00000104564 137 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms