Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm25896-201ENSMUST00000083713 136 ntBASIC3.8□□□□□ -1.8
Ssu72Q9CY97 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ssu72Q9CY97 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Ssu72Q9CY97 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ssu72Q9CY97 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23472-201ENSMUST00000101806 191 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm26018-201ENSMUST00000104406 128 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm14512-201ENSMUST00000117924 230 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm14845-201ENSMUST00000121259 306 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm22321-201ENSMUST00000157152 104 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23960-201ENSMUST00000157206 131 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23713-201ENSMUST00000157353 70 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23906-201ENSMUST00000157573 128 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm22615-201ENSMUST00000158102 70 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm24497-201ENSMUST00000177868 191 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Spin2g-201ENSMUST00000178425 687 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Mir7006-201ENSMUST00000183624 69 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm37923-201ENSMUST00000191624 161 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm38238-201ENSMUST00000194334 346 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm30341-201ENSMUST00000194363 289 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm22620-201ENSMUST00000082700 133 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23444-201ENSMUST00000082922 191 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm23453-201ENSMUST00000083326 106 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.79□□□□□ -1.8
Ssu72Q9CY97 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ssu72Q9CY97 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm14922-201ENSMUST00000121131 163 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm26026-201ENSMUST00000122726 123 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm22890-201ENSMUST00000158642 144 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm27733-201ENSMUST00000184803 68 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm8942-201ENSMUST00000217892 400 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm7065-201ENSMUST00000222150 474 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm22294-201ENSMUST00000083308 104 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ssu72Q9CY97 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Ssu72Q9CY97 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Ssu72Q9CY97 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
Ssu72Q9CY97 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm14593-201ENSMUST00000119948 294 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm23781-201ENSMUST00000157940 308 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm24106-201ENSMUST00000175498 127 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm25615-201ENSMUST00000177836 94 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm23571-201ENSMUST00000180073 127 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm6947-201ENSMUST00000186254 78 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm28976-201ENSMUST00000188070 144 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm43704-201ENSMUST00000196164 496 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm43749-201ENSMUST00000199345 352 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm44519-201ENSMUST00000206486 122 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm25200-201ENSMUST00000083094 130 ntBASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Ssu72Q9CY97 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms