Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm45522-201ENSMUST00000210784 166 ntBASIC2.6□□□□□ -1.99
Ccdc43Q9CR29 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.6□□□□□ -1.99
Ccdc43Q9CR29 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.6□□□□□ -1.99
Ccdc43Q9CR29 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.6□□□□□ -1.99
Ccdc43Q9CR29 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.6□□□□□ -1.99
Ccdc43Q9CR29 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm22752-201ENSMUST00000102083 109 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm25876-201ENSMUST00000104329 119 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm12370-201ENSMUST00000117809 604 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm14887-201ENSMUST00000119522 663 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm14638-201ENSMUST00000121338 216 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm12872-201ENSMUST00000121835 320 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm22389-201ENSMUST00000158193 301 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm24769-201ENSMUST00000158506 129 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm37727-201ENSMUST00000191637 819 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm38333-201ENSMUST00000193608 604 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm37353-201ENSMUST00000194497 313 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Mir7215-201ENSMUST00000200383 51 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm9318-201ENSMUST00000222444 438 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.59□□□□□ -1.99
Ccdc43Q9CR29 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.59□□□□□ -2
Ccdc43Q9CR29 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.59□□□□□ -2
Ccdc43Q9CR29 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm22831-201ENSMUST00000102473 109 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm24122-201ENSMUST00000104107 132 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm15211-201ENSMUST00000118932 528 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm14013-201ENSMUST00000119006 270 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm25102-201ENSMUST00000122479 112 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm14333-201ENSMUST00000130484 264 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm24922-201ENSMUST00000158511 102 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm22076-201ENSMUST00000158601 84 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm23196-201ENSMUST00000158806 107 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm27220-201ENSMUST00000183453 262 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Mir6916-201ENSMUST00000184514 63 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm29640-201ENSMUST00000187972 278 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm44024-201ENSMUST00000203008 476 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm18774-201ENSMUST00000218269 601 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.58□□□□□ -2
Ccdc43Q9CR29 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm26263-201ENSMUST00000083281 164 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm25628-201ENSMUST00000084002 105 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.58□□□□□ -2
Ccdc43Q9CR29 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc43Q9CR29 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm11598-201ENSMUST00000119257 357 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm24075-201ENSMUST00000158175 72 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm22947-201ENSMUST00000158559 91 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm22851-201ENSMUST00000178741 94 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm25074-201ENSMUST00000178782 94 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm8532-201ENSMUST00000179174 461 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm23862-201ENSMUST00000180342 94 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm9022-202ENSMUST00000183285 483 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm37557-201ENSMUST00000191640 139 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm43708-201ENSMUST00000198857 961 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm7039-201ENSMUST00000205138 346 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm2676-201ENSMUST00000207279 606 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm5374-201ENSMUST00000222868 657 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm26228-201ENSMUST00000082512 107 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm25080-201ENSMUST00000082526 107 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm25518-201ENSMUST00000083864 107 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.57□□□□□ -2
Ccdc43Q9CR29 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ccdc43Q9CR29 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm14748-201ENSMUST00000119819 411 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm13913-201ENSMUST00000121126 260 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm25325-201ENSMUST00000122559 86 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm22554-201ENSMUST00000157798 147 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm23642-201ENSMUST00000157858 258 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms