Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm13831-201ENSMUST00000118764 302 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm13852-201ENSMUST00000122350 242 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm25115-201ENSMUST00000157187 140 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm23957-201ENSMUST00000157209 90 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm22212-201ENSMUST00000158096 106 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm22637-201ENSMUST00000158144 283 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm17186-201ENSMUST00000171742 456 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Mir5134-201ENSMUST00000175529 78 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm27828-201ENSMUST00000184108 119 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm44208-201ENSMUST00000205199 421 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm45539-201ENSMUST00000210313 428 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.48□□□□□ -1.69
Trim11Q99PQ2 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim11Q99PQ2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm24172-201ENSMUST00000104127 117 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm12982-201ENSMUST00000117408 190 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm12617-201ENSMUST00000121268 381 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm23184-201ENSMUST00000122594 131 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm23905-201ENSMUST00000157568 109 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm23023-201ENSMUST00000158767 109 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm7241-201ENSMUST00000159853 357 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm2862-201ENSMUST00000161524 328 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm16162-201ENSMUST00000162296 297 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm29429-201ENSMUST00000187071 121 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm44354-201ENSMUST00000196017 143 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm25930-201ENSMUST00000082785 107 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Mir370-201ENSMUST00000083499 79 ntBASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim11Q99PQ2 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm11566-201ENSMUST00000118550 203 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm14748-201ENSMUST00000119819 411 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm22107-201ENSMUST00000122548 100 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm23231-201ENSMUST00000157299 104 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm24014-201ENSMUST00000157728 157 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Mir5129-201ENSMUST00000174938 78 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm27535-201ENSMUST00000183814 157 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Mir6335-201ENSMUST00000184081 98 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm43853-201ENSMUST00000197162 301 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm23518-201ENSMUST00000082835 153 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Snord22-201ENSMUST00000083153 126 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Gm23039-201ENSMUST00000083870 161 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim11Q99PQ2 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.46□□□□□ -1.7
Trim11Q99PQ2 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm25421-201ENSMUST00000104218 164 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm14894-201ENSMUST00000117170 270 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm12252-201ENSMUST00000119517 219 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm12884-201ENSMUST00000120371 325 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm13210-201ENSMUST00000121483 273 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm11645-201ENSMUST00000121589 649 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm15065-201ENSMUST00000121699 273 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm16327-201ENSMUST00000137146 228 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm23554-201ENSMUST00000157818 110 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm24850-201ENSMUST00000158029 119 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm28627-201ENSMUST00000186141 453 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm37449-201ENSMUST00000193016 270 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm8790-201ENSMUST00000194108 322 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm18658-201ENSMUST00000195558 270 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Gm22294-201ENSMUST00000083308 104 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.45□□□□□ -1.7
Trim11Q99PQ2 Mir30e-201ENSMUST00000083475 92 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms