Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir322-201ENSMUST00000083484 95 ntBASIC1.17□□□□□ -2.22
Nup35Q8R4R6 Snord7-201ENSMUST00000083781 97 ntBASIC1.17□□□□□ -2.22
Nup35Q8R4R6 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.17□□□□□ -2.22
Nup35Q8R4R6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm25541-201ENSMUST00000116888 126 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm17061-201ENSMUST00000163167 499 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm25642-201ENSMUST00000175137 66 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm25035-201ENSMUST00000175414 77 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm29550-201ENSMUST00000185543 285 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm28466-201ENSMUST00000190678 659 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm44844-201ENSMUST00000207242 336 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm18453-201ENSMUST00000208000 626 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Gm22974-201ENSMUST00000083301 103 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Mir148b-201ENSMUST00000083626 97 ntBASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.16□□□□□ -2.22
Nup35Q8R4R6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Nup35Q8R4R6 Gm24582-201ENSMUST00000103967 103 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm22779-201ENSMUST00000104085 107 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm15211-201ENSMUST00000118932 528 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm13903-201ENSMUST00000120945 193 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm23043-201ENSMUST00000157890 109 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm38238-201ENSMUST00000194334 346 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm44656-201ENSMUST00000208428 490 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm23246-201ENSMUST00000083371 67 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Mir29c-201ENSMUST00000083614 88 ntBASIC1.15□□□□□ -2.23
Nup35Q8R4R6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm24858-201ENSMUST00000158058 323 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Mir669n-201ENSMUST00000158636 54 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm24551-201ENSMUST00000158645 92 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Mir5118-201ENSMUST00000175551 67 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Mir7068-201ENSMUST00000183439 74 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28838-201ENSMUST00000186338 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm29635-201ENSMUST00000187221 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm29026-201ENSMUST00000187787 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28797-201ENSMUST00000188543 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28855-201ENSMUST00000188680 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28705-201ENSMUST00000189548 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28404-201ENSMUST00000190242 453 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28939-201ENSMUST00000190351 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm28223-201ENSMUST00000190469 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm29092-201ENSMUST00000190768 315 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm8747-201ENSMUST00000195392 751 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm18252-203ENSMUST00000215855 757 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gm46312-201ENSMUST00000220961 420 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.14□□□□□ -2.23
Nup35Q8R4R6 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Mir223-201ENSMUST00000102112 110 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm25213-201ENSMUST00000102388 113 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm22091-201ENSMUST00000116908 127 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm12825-201ENSMUST00000120249 563 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm24333-201ENSMUST00000175101 84 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm21737-201ENSMUST00000178112 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm21729-201ENSMUST00000180058 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm21853-201ENSMUST00000180071 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm20901-201ENSMUST00000180177 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Mir6917-201ENSMUST00000184111 61 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm27964-201ENSMUST00000185195 62 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm29073-201ENSMUST00000185563 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm29495-201ENSMUST00000189319 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm28151-201ENSMUST00000189404 951 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm28090-201ENSMUST00000189458 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm21647-201ENSMUST00000189755 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm29165-201ENSMUST00000190655 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm29211-201ENSMUST00000191470 664 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm36891-201ENSMUST00000191995 655 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.13□□□□□ -2.23
Nup35Q8R4R6 Gm29950-201ENSMUST00000195273 237 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms