Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm15529-201ENSMUST00000121833 994 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm22037-201ENSMUST00000157280 296 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm26393-201ENSMUST00000157625 129 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm22851-201ENSMUST00000178741 94 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm25074-201ENSMUST00000178782 94 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.57□□□□□ -2
Ccdc38Q8CDN8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc38Q8CDN8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm22494-201ENSMUST00000104495 128 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm15714-201ENSMUST00000117168 250 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm15029-201ENSMUST00000119742 199 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm14593-201ENSMUST00000119948 294 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm6568-201ENSMUST00000122274 697 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm14629-201ENSMUST00000122428 144 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm24937-201ENSMUST00000122597 134 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm22534-201ENSMUST00000158173 104 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm25866-201ENSMUST00000158245 112 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm23813-201ENSMUST00000175153 77 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Mir3076-201ENSMUST00000175415 60 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Mir7667-201ENSMUST00000183866 63 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm18185-201ENSMUST00000186725 667 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm37771-201ENSMUST00000193121 265 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc38Q8CDN8 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm46389-201ENSMUST00000223199 392 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm22229-201ENSMUST00000082987 108 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm23727-201ENSMUST00000083352 164 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.56□□□□□ -2
Ccdc38Q8CDN8 Gm11935-201ENSMUST00000118608 399 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm11358-201ENSMUST00000122310 373 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm23212-201ENSMUST00000122718 60 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm25808-201ENSMUST00000122784 284 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm16355-201ENSMUST00000128606 231 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm14333-201ENSMUST00000130484 264 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm8580-201ENSMUST00000160295 464 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm29516-201ENSMUST00000190402 468 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm37455-201ENSMUST00000191993 529 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm43286-201ENSMUST00000197420 424 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm18000-201ENSMUST00000212153 800 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm8940-201ENSMUST00000212585 219 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc38Q8CDN8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm23454-201ENSMUST00000083332 133 ntBASIC2.55□□□□□ -2
Ccdc38Q8CDN8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm23422-201ENSMUST00000102000 107 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm22771-201ENSMUST00000104449 91 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm12053-201ENSMUST00000119022 252 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm15497-201ENSMUST00000119137 551 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm23429-201ENSMUST00000122486 149 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm22038-201ENSMUST00000157277 242 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm23324-201ENSMUST00000157421 131 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm27761-201ENSMUST00000184091 131 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm37353-201ENSMUST00000194497 313 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm45071-201ENSMUST00000205353 571 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm45366-201ENSMUST00000209828 384 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm22806-201ENSMUST00000082738 136 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr575-201ENSMUST00000084812 957 ntBASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ccdc38Q8CDN8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc38Q8CDN8 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Mir687-201ENSMUST00000102166 89 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm25876-201ENSMUST00000104329 119 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Mir7j-201ENSMUST00000184427 122 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Mir496b-201ENSMUST00000184935 113 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm20058-201ENSMUST00000186939 284 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm37869-201ENSMUST00000193385 595 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm19032-201ENSMUST00000208584 592 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm22572-201ENSMUST00000082985 105 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Gm26166-201ENSMUST00000083788 107 ntBASIC2.53□□□□□ -2
Ccdc38Q8CDN8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms