Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.3□□□□□ -1.88
Sh3rf2Q8BZT2 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm26423-201ENSMUST00000104277 128 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm13876-201ENSMUST00000118451 261 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm14792-201ENSMUST00000119725 258 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm12640-201ENSMUST00000120097 310 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm14389-201ENSMUST00000140453 241 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm5958-201ENSMUST00000147698 297 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm26149-201ENSMUST00000157432 108 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm26041-201ENSMUST00000158148 108 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm26585-201ENSMUST00000180890 630 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm27747-201ENSMUST00000184707 85 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm7837-201ENSMUST00000190873 412 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm7182-201ENSMUST00000193351 732 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm43899-201ENSMUST00000203675 246 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm45508-201ENSMUST00000209298 299 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm22979-201ENSMUST00000082609 159 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm24316-201ENSMUST00000083041 107 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm22974-201ENSMUST00000083301 103 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Mir452-201ENSMUST00000093629 85 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf2Q8BZT2 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm15526-201ENSMUST00000112504 204 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm22114-201ENSMUST00000177756 107 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm27893-201ENSMUST00000184408 194 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm42925-201ENSMUST00000197359 285 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.28□□□□□ -1.88
Sh3rf2Q8BZT2 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Sh3rf2Q8BZT2 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm12771-201ENSMUST00000120246 135 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm15213-201ENSMUST00000122098 216 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm26027-201ENSMUST00000122725 268 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm24627-201ENSMUST00000122764 138 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm24914-201ENSMUST00000157285 313 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm25486-201ENSMUST00000158726 63 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm17072-201ENSMUST00000166673 658 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm26501-201ENSMUST00000178307 107 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Mir6993-201ENSMUST00000184912 65 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm29262-201ENSMUST00000190084 196 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm20039-201ENSMUST00000210329 394 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm22571-201ENSMUST00000082984 70 ntBASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.27□□□□□ -1.89
Sh3rf2Q8BZT2 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm23142-201ENSMUST00000101848 105 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm26240-201ENSMUST00000101893 105 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm14774-201ENSMUST00000117857 536 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm24720-201ENSMUST00000157518 166 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm24666-201ENSMUST00000158937 167 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm20534-201ENSMUST00000172957 172 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm20542-201ENSMUST00000174582 372 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm20257-202ENSMUST00000188643 130 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm44964-201ENSMUST00000207011 273 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm18453-201ENSMUST00000208000 626 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm45513-201ENSMUST00000210228 376 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm22061-201ENSMUST00000082557 107 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm24457-201ENSMUST00000083196 105 ntBASIC3.26□□□□□ -1.89
Sh3rf2Q8BZT2 Gm26329-201ENSMUST00000093723 110 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms