Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23517-201ENSMUST00000082830 192 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm25404-201ENSMUST00000082970 107 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm24698-201ENSMUST00000083883 130 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Gm23503-201ENSMUST00000083903 107 ntBASIC2.36□□□□□ -2.03
Ccdc40Q8BI79 Mir687-201ENSMUST00000102166 89 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm12646-201ENSMUST00000119144 238 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm26280-201ENSMUST00000157096 101 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm23269-201ENSMUST00000178701 107 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Zfp950-206ENSMUST00000178819 171 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm11395-201ENSMUST00000181011 499 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm28560-201ENSMUST00000186091 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm28334-201ENSMUST00000186653 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm28495-201ENSMUST00000188452 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm28232-201ENSMUST00000188683 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm28481-201ENSMUST00000189231 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm29059-201ENSMUST00000191534 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm37765-201ENSMUST00000192395 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm37237-201ENSMUST00000192893 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm36968-201ENSMUST00000193737 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm38290-201ENSMUST00000195238 315 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Gm44794-201ENSMUST00000206550 411 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Ccdc40Q8BI79 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm22782-201ENSMUST00000104082 132 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm23889-201ENSMUST00000122689 104 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm23332-201ENSMUST00000157424 275 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm25339-201ENSMUST00000157458 232 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm27396-201ENSMUST00000157708 58 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Snord11-201ENSMUST00000158468 84 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm25670-201ENSMUST00000178423 107 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm26239-201ENSMUST00000178842 107 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm24267-201ENSMUST00000179841 107 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm19032-201ENSMUST00000208584 592 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm5374-201ENSMUST00000222868 657 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm24292-201ENSMUST00000082888 107 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm23454-201ENSMUST00000083332 133 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Gm22353-201ENSMUST00000083918 136 ntBASIC2.34□□□□□ -2.03
Ccdc40Q8BI79 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Mir190b-201ENSMUST00000104803 80 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm14774-201ENSMUST00000117857 536 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm12934-201ENSMUST00000119221 343 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm13581-201ENSMUST00000120675 278 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm24937-201ENSMUST00000122597 134 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm23586-201ENSMUST00000157657 123 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm24900-201ENSMUST00000158128 134 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm26214-201ENSMUST00000158581 107 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm23196-201ENSMUST00000158806 107 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm20543-201ENSMUST00000174200 726 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Mir3075-201ENSMUST00000175340 85 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Mir6925-201ENSMUST00000197857 70 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm18991-201ENSMUST00000209225 746 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm7214-201ENSMUST00000222428 272 ntBASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc40Q8BI79 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm11598-201ENSMUST00000119257 357 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm12721-201ENSMUST00000120621 268 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm13368-201ENSMUST00000122443 430 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm25325-201ENSMUST00000122559 86 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm23885-201ENSMUST00000122682 294 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm15281-201ENSMUST00000125181 351 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Mir1942-201ENSMUST00000157274 63 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm22597-201ENSMUST00000157602 80 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm24075-201ENSMUST00000158175 72 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm24769-201ENSMUST00000158506 129 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm22633-201ENSMUST00000179834 107 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm27991-201ENSMUST00000184804 137 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm28399-201ENSMUST00000186221 318 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm28572-201ENSMUST00000187444 318 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm6796-201ENSMUST00000211919 243 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms