Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm34015-201ENSMUST00000194908 451 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm25185-201ENSMUST00000157754 96 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm23181-201ENSMUST00000158685 110 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20794-201ENSMUST00000177626 628 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm22131-201ENSMUST00000178415 94 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm28356-202ENSMUST00000187566 858 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20885-201ENSMUST00000190192 654 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm33571-201ENSMUST00000193271 657 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm36866-201ENSMUST00000193343 657 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm36047-201ENSMUST00000193659 657 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20857-201ENSMUST00000194766 657 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm20858-201ENSMUST00000195459 657 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm30638-201ENSMUST00000195570 656 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Gm45701-201ENSMUST00000212049 235 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.2□□□□□ -2.22
Topbp1Q6ZQF0 Mir667-201ENSMUST00000102441 92 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm4910-201ENSMUST00000119605 366 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Mir1904-201ENSMUST00000122702 80 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm16129-201ENSMUST00000152628 486 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm25332-201ENSMUST00000158038 105 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm23180-201ENSMUST00000158686 125 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Gm7329-201ENSMUST00000185915 210 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Mir137-201ENSMUST00000083635 73 ntBASIC1.19□□□□□ -2.22
Topbp1Q6ZQF0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 Gm43407-201ENSMUST00000199816 317 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 Gm17990-201ENSMUST00000211728 553 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.18□□□□□ -2.22
Topbp1Q6ZQF0 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm15530-201ENSMUST00000122206 555 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm13131-201ENSMUST00000122228 321 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm24772-201ENSMUST00000158507 110 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm28862-201ENSMUST00000188246 163 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm20811-201ENSMUST00000190500 553 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm23517-201ENSMUST00000082830 192 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm22293-201ENSMUST00000083314 109 ntBASIC1.17□□□□□ -2.22
Topbp1Q6ZQF0 Gm14411-201ENSMUST00000121798 914 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm25961-201ENSMUST00000157174 135 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm24925-201ENSMUST00000178157 107 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm28437-201ENSMUST00000190277 783 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Mir107-201ENSMUST00000083660 87 ntBASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Topbp1Q6ZQF0 Gm16373-201ENSMUST00000129517 303 ntBASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Gm42516-201ENSMUST00000198691 767 ntBASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Gm18414-201ENSMUST00000210858 694 ntBASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.15□□□□□ -2.22
Topbp1Q6ZQF0 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm12646-201ENSMUST00000119144 238 ntBASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm14678-201ENSMUST00000121396 482 ntBASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm14840-201ENSMUST00000122135 594 ntBASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm24594-201ENSMUST00000122502 99 ntBASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm25624-201ENSMUST00000157222 275 ntBASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Topbp1Q6ZQF0 Gm9830-201ENSMUST00000178509 357 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms