Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm20102-201ENSMUST00000222445 220 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Gm24037-201ENSMUST00000082871 180 ntBASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Smarca1Q6PGB8 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm12871-201ENSMUST00000118758 438 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm13475-201ENSMUST00000119290 234 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm14551-201ENSMUST00000120802 256 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm26256-201ENSMUST00000122499 186 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm25339-201ENSMUST00000157458 232 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm29352-201ENSMUST00000188054 544 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm23370-202ENSMUST00000197008 129 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm44524-201ENSMUST00000203899 271 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm44825-201ENSMUST00000207557 150 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm44598-201ENSMUST00000207566 150 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm4945-201ENSMUST00000075152 453 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.18□□□□□ -1.9
Smarca1Q6PGB8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm12876-201ENSMUST00000120975 408 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm11363-201ENSMUST00000121672 548 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm23184-201ENSMUST00000122594 131 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm17148-201ENSMUST00000164702 249 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm7654-201ENSMUST00000186738 683 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm43901-201ENSMUST00000203247 453 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.17□□□□□ -1.9
Smarca1Q6PGB8 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Snord14c-201ENSMUST00000101927 86 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm13329-201ENSMUST00000117063 265 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm12765-201ENSMUST00000117273 615 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm14906-201ENSMUST00000119265 390 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Mir1942-201ENSMUST00000157274 63 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm23895-201ENSMUST00000158108 160 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm43521-201ENSMUST00000197838 255 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm43431-201ENSMUST00000198577 340 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm43107-201ENSMUST00000198729 255 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm44060-201ENSMUST00000204440 410 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm23517-201ENSMUST00000082830 192 ntBASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smarca1Q6PGB8 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Smarca1Q6PGB8 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Smarca1Q6PGB8 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.15□□□□□ -1.9
Smarca1Q6PGB8 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm14073-201ENSMUST00000117344 381 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm22891-201ENSMUST00000158641 164 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm24736-201ENSMUST00000158862 130 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm22853-201ENSMUST00000174974 131 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Mir3103-201ENSMUST00000175474 67 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Snord93-201ENSMUST00000175580 71 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm25360-201ENSMUST00000178786 191 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm27624-201ENSMUST00000185047 177 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm27505-201ENSMUST00000185071 110 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm20058-201ENSMUST00000186939 284 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm37353-201ENSMUST00000194497 313 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm44870-201ENSMUST00000207291 357 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Gm5374-201ENSMUST00000222868 657 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarca1Q6PGB8 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms