Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm22389-201ENSMUST00000158193 301 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Gm27522-201ENSMUST00000183949 230 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Mir6372-201ENSMUST00000185114 109 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Gm37576-201ENSMUST00000194228 372 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Gm19147-201ENSMUST00000199622 652 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Mir7215-201ENSMUST00000200383 51 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Nup98Q6PFD9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm14049-201ENSMUST00000121009 636 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm25624-201ENSMUST00000157222 275 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm27761-201ENSMUST00000184091 131 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mir6540-201ENSMUST00000184886 108 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm8041-201ENSMUST00000199755 616 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 AC159246.1-201ENSMUST00000214478 249 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm26439-201ENSMUST00000082592 106 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm13602-201ENSMUST00000122405 493 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Snora24-201ENSMUST00000174989 130 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mir3112-201ENSMUST00000175431 82 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm25312-201ENSMUST00000178972 107 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm29192-201ENSMUST00000190942 377 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm31511-201ENSMUST00000193134 657 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm46994-201ENSMUST00000221523 219 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Nup98Q6PFD9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.17□□□□□ -2.22
Nup98Q6PFD9 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm12872-201ENSMUST00000121835 320 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm25220-201ENSMUST00000157546 95 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm22769-201ENSMUST00000158367 98 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm23008-201ENSMUST00000158946 80 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Nup98Q6PFD9 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.16□□□□□ -2.22
Nup98Q6PFD9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Nup98Q6PFD9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm9703-201ENSMUST00000119573 343 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm17162-201ENSMUST00000168538 473 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Mir6380-201ENSMUST00000184334 81 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm9541-201ENSMUST00000188409 502 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm18338-201ENSMUST00000222381 560 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.15□□□□□ -2.22
Nup98Q6PFD9 Gm26421-201ENSMUST00000104279 132 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm12191-201ENSMUST00000118307 348 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm23463-201ENSMUST00000122468 99 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm9071-201ENSMUST00000165915 474 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Mir6376-201ENSMUST00000185149 131 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm44358-201ENSMUST00000196301 98 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm43286-201ENSMUST00000197420 424 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Gm44058-201ENSMUST00000204335 467 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.15□□□□□ -2.23
Nup98Q6PFD9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
Nup98Q6PFD9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms