Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm23422-201ENSMUST00000102000 107 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm13475-201ENSMUST00000119290 234 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm11556-201ENSMUST00000120751 288 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm24716-201ENSMUST00000157524 104 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm24922-201ENSMUST00000158511 102 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm18588-201ENSMUST00000177308 492 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm24518-201ENSMUST00000180275 94 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm29658-201ENSMUST00000185404 230 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm28825-201ENSMUST00000186233 238 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm43007-201ENSMUST00000197618 291 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm2436-201ENSMUST00000219562 774 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm10298-201ENSMUST00000074801 265 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm26166-201ENSMUST00000083788 107 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Olfr575-201ENSMUST00000084812 957 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm650-201ENSMUST00000144428 1551 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Snrnp40Q6PE01 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.56□□□□□ -2
Snrnp40Q6PE01 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm25500-201ENSMUST00000104426 123 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm9009-201ENSMUST00000117321 326 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm12513-201ENSMUST00000118617 352 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm24908-201ENSMUST00000157294 127 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm15914-201ENSMUST00000161922 309 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm20660-201ENSMUST00000177515 289 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Mir5123-201ENSMUST00000177794 83 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm5329-201ENSMUST00000186898 463 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm37037-201ENSMUST00000194475 424 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm43193-201ENSMUST00000197732 441 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm5001-201ENSMUST00000204361 331 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm44478-201ENSMUST00000204875 114 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm34783-201ENSMUST00000209159 303 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm19572-201ENSMUST00000214326 338 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.55□□□□□ -2
Snrnp40Q6PE01 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Mir669l-201ENSMUST00000103771 98 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm25466-201ENSMUST00000103995 132 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm22779-201ENSMUST00000104085 107 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm13876-201ENSMUST00000118451 261 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm26256-201ENSMUST00000122499 186 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm14364-201ENSMUST00000129209 267 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm23332-201ENSMUST00000157424 275 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm23752-201ENSMUST00000157584 115 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm22836-201ENSMUST00000158441 61 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm22668-201ENSMUST00000158716 260 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm4468-201ENSMUST00000170206 294 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Mir5118-201ENSMUST00000175551 67 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm24168-201ENSMUST00000178825 107 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm20058-201ENSMUST00000186939 284 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm6801-201ENSMUST00000190697 339 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm43600-201ENSMUST00000202134 223 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.54□□□□□ -2
Snrnp40Q6PE01 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm23515-201ENSMUST00000082829 107 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm26263-201ENSMUST00000083281 164 ntBASIC2.54□□□□□ -2
Snrnp40Q6PE01 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms