Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm35736-201ENSMUST00000203681 313 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Gm44909-201ENSMUST00000208756 165 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col7a1Q63870 Gm10038-201ENSMUST00000077233 441 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Snora34-201ENSMUST00000083402 138 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Col7a1Q63870 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Gm25805-201ENSMUST00000122788 108 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Gm26352-201ENSMUST00000158223 125 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Mir3089-201ENSMUST00000175350 84 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Col7a1Q63870 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Col7a1Q63870 Gm23969-201ENSMUST00000083324 74 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 AC164164.1-201ENSMUST00000223245 2340 ntBASIC0.44□□□□□ -2.34
Col7a1Q63870 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm14915-201ENSMUST00000120747 204 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm22559-201ENSMUST00000157329 134 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm26236-201ENSMUST00000175536 137 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm6113-201ENSMUST00000180319 639 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm22507-201ENSMUST00000082773 160 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm37761-201ENSMUST00000194989 2098 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm14069-201ENSMUST00000120815 229 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm20534-201ENSMUST00000172957 172 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Col7a1Q63870 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 CT010480.1-201ENSMUST00000223612 363 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.43□□□□□ -2.34
Col7a1Q63870 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.43□□□□□ -2.34
Col7a1Q63870 Gm22689-201ENSMUST00000102452 110 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm22315-201ENSMUST00000158010 143 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Mir1966-201ENSMUST00000158807 108 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm43043-201ENSMUST00000196579 412 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Mir151-201ENSMUST00000083678 68 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm24468-201ENSMUST00000104489 104 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm15382-201ENSMUST00000118011 537 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Col7a1Q63870 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm45273-201ENSMUST00000211559 281 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Col7a1Q63870 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.42□□□□□ -2.34
Col7a1Q63870 Gm11284-201ENSMUST00000121910 1887 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm9613-201ENSMUST00000171662 196 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm44058-201ENSMUST00000204335 467 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col7a1Q63870 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
Col7a1Q63870 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm6591-201ENSMUST00000121063 434 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm22516-201ENSMUST00000158266 124 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm17528-201ENSMUST00000171026 239 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm27402-201ENSMUST00000183890 120 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm37000-201ENSMUST00000193058 428 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm44211-201ENSMUST00000204867 145 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC0.41□□□□□ -2.34
Col7a1Q63870 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.41□□□□□ -2.34
Col7a1Q63870 Gm24431-201ENSMUST00000104073 66 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm11891-201ENSMUST00000121241 619 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm22537-201ENSMUST00000158172 199 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Mir7241-201ENSMUST00000184532 64 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm23850-201ENSMUST00000083830 169 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm25683-201ENSMUST00000083940 131 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Col7a1Q63870 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm14907-201ENSMUST00000121948 854 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm25544-201ENSMUST00000122676 120 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm22425-201ENSMUST00000158532 138 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm22633-201ENSMUST00000179834 107 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm37213-201ENSMUST00000193077 586 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm43407-201ENSMUST00000199816 317 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm44301-201ENSMUST00000200362 143 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Col7a1Q63870 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.4□□□□□ -2.35
Col7a1Q63870 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm13602-201ENSMUST00000122405 493 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm38323-201ENSMUST00000192450 210 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Mir32-201ENSMUST00000083610 70 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm24296-201ENSMUST00000158297 106 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm22158-201ENSMUST00000158411 126 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms