Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm19252-201ENSMUST00000204705 305 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm44472-201ENSMUST00000204922 943 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.28□□□□□ -1.88
CtcfQ61164 Gm45395-201ENSMUST00000209891 559 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm2829-201ENSMUST00000213121 499 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gm25203-201ENSMUST00000082842 215 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CtcfQ61164 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.28□□□□□ -1.88
CtcfQ61164 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CtcfQ61164 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CtcfQ61164 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CtcfQ61164 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcfQ61164 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CtcfQ61164 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CtcfQ61164 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcfQ61164 Gm14825-201ENSMUST00000113538 701 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Mir3103-201ENSMUST00000175474 67 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Gm21726-201ENSMUST00000179654 392 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Gm29231-201ENSMUST00000179850 319 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Gm27869-201ENSMUST00000184327 122 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Mir8096-201ENSMUST00000184526 127 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.27□□□□□ -1.89
CtcfQ61164 Gm44476-201ENSMUST00000196225 91 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CtcfQ61164 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Snord68-201ENSMUST00000082516 86 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Gm23679-201ENSMUST00000083161 119 ntBASIC3.27□□□□□ -1.89
CtcfQ61164 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcfQ61164 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CtcfQ61164 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CtcfQ61164 Gm24119-201ENSMUST00000103979 246 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm14020-201ENSMUST00000118165 662 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm12871-201ENSMUST00000118758 438 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm12276-201ENSMUST00000121709 301 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm15986-201ENSMUST00000122153 400 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm23214-201ENSMUST00000122716 157 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm14562-201ENSMUST00000129885 543 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm23411-201ENSMUST00000157988 62 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm17148-201ENSMUST00000164702 249 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm25671-201ENSMUST00000178612 105 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm23307-201ENSMUST00000179167 105 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm25286-201ENSMUST00000179790 105 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Mir6371-201ENSMUST00000184470 111 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm43510-201ENSMUST00000197922 353 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.26□□□□□ -1.89
CtcfQ61164 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.26□□□□□ -1.89
CtcfQ61164 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.26□□□□□ -1.89
CtcfQ61164 Gm45420-201ENSMUST00000211243 425 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm7948-201ENSMUST00000212607 844 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Gm10088-201ENSMUST00000074116 423 ntBASIC3.26□□□□□ -1.89
CtcfQ61164 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CtcfQ61164 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CtcfQ61164 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CtcfQ61164 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CtcfQ61164 Gm15282-201ENSMUST00000117707 300 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm14980-201ENSMUST00000121247 736 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm14972-201ENSMUST00000121780 364 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm23213-201ENSMUST00000122715 313 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CtcfQ61164 Gm24784-201ENSMUST00000157640 62 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm24504-201ENSMUST00000157679 100 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm18520-201ENSMUST00000174783 658 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm25361-201ENSMUST00000179358 76 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm27374-201ENSMUST00000183660 81 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm29602-201ENSMUST00000186887 442 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm37586-201ENSMUST00000193654 204 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm37616-201ENSMUST00000193974 322 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm44425-201ENSMUST00000203739 429 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm29818-201ENSMUST00000218070 165 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.25□□□□□ -1.89
CtcfQ61164 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Snora23-201ENSMUST00000082517 184 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm23645-201ENSMUST00000083228 108 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm24764-201ENSMUST00000083686 199 ntBASIC3.25□□□□□ -1.89
CtcfQ61164 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CtcfQ61164 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CtcfQ61164 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CtcfQ61164 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CtcfQ61164 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CtcfQ61164 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CtcfQ61164 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CtcfQ61164 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CtcfQ61164 Gm23766-201ENSMUST00000103894 80 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Mir878-201ENSMUST00000104680 78 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm13672-201ENSMUST00000117554 459 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm12235-201ENSMUST00000118596 170 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm14069-201ENSMUST00000120815 229 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms