Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm15106-201ENSMUST00000119691 821 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.12□□□□□ -2.07
Usf1Q61069 Gm23981-201ENSMUST00000157136 106 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm25113-201ENSMUST00000157185 143 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm24911-201ENSMUST00000157292 136 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.12□□□□□ -2.07
Usf1Q61069 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Usf1Q61069 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.12□□□□□ -2.07
Usf1Q61069 Gm44524-201ENSMUST00000203899 271 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.12□□□□□ -2.07
Usf1Q61069 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm26446-201ENSMUST00000082455 103 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Gm22229-201ENSMUST00000082987 108 ntBASIC2.12□□□□□ -2.07
Usf1Q61069 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Usf1Q61069 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usf1Q61069 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usf1Q61069 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm22779-201ENSMUST00000104085 107 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm23010-201ENSMUST00000104151 126 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm25876-201ENSMUST00000104329 119 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm11389-201ENSMUST00000121407 430 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm24839-201ENSMUST00000122602 107 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm24908-201ENSMUST00000157294 127 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Usf1Q61069 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usf1Q61069 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Usf1Q61069 Gm22633-201ENSMUST00000179834 107 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Usf1Q61069 Gm44282-201ENSMUST00000203199 190 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.11□□□□□ -2.07
Usf1Q61069 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.11□□□□□ -2.07
Usf1Q61069 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usf1Q61069 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Usf1Q61069 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.11□□□□□ -2.07
Usf1Q61069 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm23766-201ENSMUST00000103894 80 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Snora36b-201ENSMUST00000104383 132 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm13355-201ENSMUST00000117996 317 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm15497-201ENSMUST00000119137 551 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm22038-201ENSMUST00000157277 242 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm24436-201ENSMUST00000157889 302 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm22159-201ENSMUST00000158412 130 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm24546-201ENSMUST00000158652 102 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm22192-201ENSMUST00000175128 85 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm27991-201ENSMUST00000184804 137 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm28356-202ENSMUST00000187566 858 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20885-201ENSMUST00000190192 654 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm19193-201ENSMUST00000190263 590 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm36866-201ENSMUST00000193343 657 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm36047-201ENSMUST00000193659 657 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20857-201ENSMUST00000194766 657 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm20858-201ENSMUST00000195459 657 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Usf1Q61069 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm44060-201ENSMUST00000204440 410 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm19140-201ENSMUST00000209790 421 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Gm25632-201ENSMUST00000083112 85 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.1□□□□□ -2.07
Usf1Q61069 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Usf1Q61069 Gm25414-201ENSMUST00000101814 107 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Usf1Q61069 Gm13341-201ENSMUST00000120780 672 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm13862-201ENSMUST00000121220 197 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm14765-201ENSMUST00000121954 326 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm23956-201ENSMUST00000157211 119 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm24716-201ENSMUST00000157524 104 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm22551-201ENSMUST00000157795 103 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm24858-201ENSMUST00000158058 323 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms