Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm24582-201ENSMUST00000103967 103 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm14669-201ENSMUST00000118841 250 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm12372-201ENSMUST00000121654 768 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm24419-201ENSMUST00000157875 332 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm22316-201ENSMUST00000158012 216 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Mir6963-201ENSMUST00000183535 71 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Mir6419-201ENSMUST00000184784 113 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm7837-201ENSMUST00000190873 412 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm37661-201ENSMUST00000191863 1550 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm34139-201ENSMUST00000196166 294 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Gm45387-201ENSMUST00000209792 632 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Mir320-201ENSMUST00000083594 82 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Mir211-201ENSMUST00000083651 106 ntBASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-1Q5R1I8 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm2869-201ENSMUST00000124359 2621 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm24122-201ENSMUST00000104107 132 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm13885-201ENSMUST00000117569 187 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm16021-201ENSMUST00000121176 219 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm23893-201ENSMUST00000158106 134 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm8207-201ENSMUST00000171204 502 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm22693-201ENSMUST00000175049 442 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm22192-201ENSMUST00000175128 85 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm27271-201ENSMUST00000183509 170 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm29389-201ENSMUST00000191562 352 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm19694-201ENSMUST00000192364 505 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm17937-201ENSMUST00000197908 742 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm44391-201ENSMUST00000198490 93 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm18453-201ENSMUST00000208000 626 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm44910-201ENSMUST00000208451 396 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Snord96a-201ENSMUST00000082791 81 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm25632-201ENSMUST00000083112 85 ntBASIC0.67□□□□□ -2.3
Trav3-1Q5R1I8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm24079-201ENSMUST00000104352 132 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm11065-201ENSMUST00000111462 228 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm14657-201ENSMUST00000117461 302 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm14923-201ENSMUST00000118270 155 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm14530-201ENSMUST00000122391 333 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm17063-201ENSMUST00000168135 456 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm25958-201ENSMUST00000175114 71 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm18415-201ENSMUST00000177464 647 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm27419-201ENSMUST00000184576 109 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28838-201ENSMUST00000186338 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm29635-201ENSMUST00000187221 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm29026-201ENSMUST00000187787 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28797-201ENSMUST00000188543 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28855-201ENSMUST00000188680 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28705-201ENSMUST00000189548 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28939-201ENSMUST00000190351 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm28223-201ENSMUST00000190469 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm29092-201ENSMUST00000190768 315 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm43676-201ENSMUST00000197532 540 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm18410-201ENSMUST00000207199 577 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm44564-201ENSMUST00000207985 180 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm22265-201ENSMUST00000082947 116 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Gm26055-201ENSMUST00000083038 107 ntBASIC0.66□□□□□ -2.3
Trav3-1Q5R1I8 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
Trav3-1Q5R1I8 Gm22091-201ENSMUST00000116908 127 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Snrpert-201ENSMUST00000121967 279 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm22718-201ENSMUST00000122701 315 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm23983-201ENSMUST00000157142 114 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm25423-201ENSMUST00000157609 107 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm22098-201ENSMUST00000157930 85 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm26024-201ENSMUST00000158657 322 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm24573-201ENSMUST00000175499 112 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Mir7679-201ENSMUST00000183379 63 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Mir7675-201ENSMUST00000184262 58 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms