Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm10360-201ENSMUST00000097219 272 ntBASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Trav5d-4Q5R1F6 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Mdga2-203ENSMUST00000113942 423 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm11813-201ENSMUST00000118586 291 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm12045-201ENSMUST00000122122 573 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm24053-201ENSMUST00000158620 105 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23181-201ENSMUST00000158685 110 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm16162-201ENSMUST00000162296 297 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm17038-201ENSMUST00000166586 494 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29231-201ENSMUST00000179850 319 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Mir6399-201ENSMUST00000184050 84 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23370-202ENSMUST00000197008 129 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm44408-201ENSMUST00000200205 66 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45296-201ENSMUST00000209625 205 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm24805-201ENSMUST00000082931 104 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.3□□□□□ -2.2
Trav5d-4Q5R1F6 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm11065-201ENSMUST00000111462 228 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22073-201ENSMUST00000122668 189 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23048-201ENSMUST00000157237 129 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22316-201ENSMUST00000158012 216 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm21726-201ENSMUST00000179654 392 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm27342-201ENSMUST00000183530 109 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm42807-201ENSMUST00000200141 329 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45439-201ENSMUST00000211723 359 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm45730-201ENSMUST00000212560 395 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm46312-201ENSMUST00000220961 420 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm25403-201ENSMUST00000082971 143 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Mir320-201ENSMUST00000083594 82 ntBASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22750-201ENSMUST00000102076 103 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm22779-201ENSMUST00000104085 107 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23010-201ENSMUST00000104151 126 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm26143-201ENSMUST00000104480 108 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm25120-201ENSMUST00000180148 79 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29603-201ENSMUST00000186792 334 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm28453-203ENSMUST00000187041 189 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm37054-201ENSMUST00000193481 543 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm29754-201ENSMUST00000206269 358 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm44962-201ENSMUST00000206460 279 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm44825-201ENSMUST00000207557 150 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm44598-201ENSMUST00000207566 150 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm23246-201ENSMUST00000083371 67 ntBASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trav5d-4Q5R1F6 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm12825-201ENSMUST00000120249 563 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm23381-201ENSMUST00000157676 94 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm22315-201ENSMUST00000158010 143 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Mir3086-201ENSMUST00000175072 87 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28838-201ENSMUST00000186338 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm29635-201ENSMUST00000187221 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm29026-201ENSMUST00000187787 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28797-201ENSMUST00000188543 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28855-201ENSMUST00000188680 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28705-201ENSMUST00000189548 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28939-201ENSMUST00000190351 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm28223-201ENSMUST00000190469 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Gm29092-201ENSMUST00000190768 315 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.27□□□□□ -2.21
Trav5d-4Q5R1F6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms