Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm18188-201ENSMUST00000219386 478 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm15896-201ENSMUST00000118045 440 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm23137-201ENSMUST00000157559 107 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm16588-201ENSMUST00000162889 355 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm17062-201ENSMUST00000166987 461 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm27428-201ENSMUST00000184289 110 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm29192-201ENSMUST00000190942 377 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm44476-201ENSMUST00000196225 91 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm44041-201ENSMUST00000203678 396 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm45439-201ENSMUST00000211723 359 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm46994-201ENSMUST00000221523 219 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm5955-201ENSMUST00000222712 219 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm23723-201ENSMUST00000082996 132 ntBASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.52□□□□□ -2.17
Col27a1Q5QNQ9 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm6664-201ENSMUST00000119138 468 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm14815-201ENSMUST00000120060 488 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm22143-201ENSMUST00000157401 203 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm8532-201ENSMUST00000179174 461 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm21726-201ENSMUST00000179654 392 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm26701-201ENSMUST00000181571 234 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm45173-201ENSMUST00000206819 305 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Gm25131-201ENSMUST00000082653 151 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Rny1-201ENSMUST00000083767 112 ntBASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col27a1Q5QNQ9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm13482-201ENSMUST00000119842 254 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm14694-201ENSMUST00000121856 282 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm25621-201ENSMUST00000157223 114 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm17164-201ENSMUST00000169013 506 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm14894-201ENSMUST00000117170 270 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm2768-201ENSMUST00000121062 250 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm12096-201ENSMUST00000121149 829 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm24836-201ENSMUST00000122609 108 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm17038-201ENSMUST00000166586 494 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm37449-201ENSMUST00000193016 270 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm37319-201ENSMUST00000193500 636 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm38154-201ENSMUST00000195444 340 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm18658-201ENSMUST00000195558 270 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm42805-201ENSMUST00000196158 276 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Gm16261-201ENSMUST00000096813 205 ntBASIC1.5□□□□□ -2.17
Col27a1Q5QNQ9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm13457-201ENSMUST00000117885 267 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm13541-201ENSMUST00000119519 283 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm12044-201ENSMUST00000120335 213 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm22186-201ENSMUST00000157822 122 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm25156-201ENSMUST00000179809 79 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm5317-201ENSMUST00000204445 847 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm44657-201ENSMUST00000208568 450 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm9973-202ENSMUST00000220926 166 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm24948-201ENSMUST00000082866 207 ntBASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Col27a1Q5QNQ9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm6587-201ENSMUST00000120219 613 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm15223-201ENSMUST00000120989 826 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm26414-201ENSMUST00000157674 269 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Gm25334-201ENSMUST00000158036 110 ntBASIC1.48□□□□□ -2.17
Col27a1Q5QNQ9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms