Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm13804-201ENSMUST00000119552 172 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm11849-201ENSMUST00000121293 261 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm23981-201ENSMUST00000157136 106 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm17161-201ENSMUST00000169187 524 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Mir6901-201ENSMUST00000185062 62 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm45395-201ENSMUST00000209891 559 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm25130-201ENSMUST00000082650 156 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Gm25813-201ENSMUST00000082748 191 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Mir137-201ENSMUST00000083635 73 ntBASIC2.22□□□□□ -2.05
Usp28Q5I043 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Usp28Q5I043 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Usp28Q5I043 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm12871-201ENSMUST00000118758 438 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm15167-201ENSMUST00000121997 187 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm16328-201ENSMUST00000126985 196 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm23068-201ENSMUST00000158239 293 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm26401-201ENSMUST00000158502 76 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Mir5099-201ENSMUST00000175257 74 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm22166-201ENSMUST00000178419 121 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm23288-201ENSMUST00000179213 121 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm23379-201ENSMUST00000180026 107 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm37869-201ENSMUST00000193385 595 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm44181-201ENSMUST00000203106 483 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm22572-201ENSMUST00000082985 105 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.21□□□□□ -2.06
Usp28Q5I043 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Usp28Q5I043 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.21□□□□□ -2.06
Usp28Q5I043 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Usp28Q5I043 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm25507-201ENSMUST00000116981 144 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm12370-201ENSMUST00000117809 604 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm12155-201ENSMUST00000121267 160 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Usp28Q5I043 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm8392-201ENSMUST00000185647 835 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm17946-201ENSMUST00000186856 538 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm28597-201ENSMUST00000187664 666 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm28779-201ENSMUST00000189678 323 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.2□□□□□ -2.06
Usp28Q5I043 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm23723-201ENSMUST00000082996 132 ntBASIC2.2□□□□□ -2.06
Usp28Q5I043 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Usp28Q5I043 Gm24098-201ENSMUST00000102075 109 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm25381-201ENSMUST00000102078 109 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm25094-201ENSMUST00000103992 131 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm22674-201ENSMUST00000104413 131 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm22496-201ENSMUST00000104493 88 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm12225-201ENSMUST00000117995 298 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm12191-201ENSMUST00000118307 348 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm9703-201ENSMUST00000119573 343 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm14588-201ENSMUST00000119895 172 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm22727-201ENSMUST00000158090 116 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm24393-201ENSMUST00000158135 97 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Usp28Q5I043 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm25175-201ENSMUST00000178712 79 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm29950-201ENSMUST00000195273 237 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm43355-201ENSMUST00000196541 346 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm42164-201ENSMUST00000198881 379 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm44478-201ENSMUST00000204875 114 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm2676-201ENSMUST00000207279 606 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Snord14d-201ENSMUST00000083424 86 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.19□□□□□ -2.06
Usp28Q5I043 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Usp28Q5I043 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms