Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm19202-201ENSMUST00000198096 808 ntBASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 Gm44055-201ENSMUST00000204376 247 ntBASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 Gm21937-201ENSMUST00000222825 218 ntBASIC0.9□□□□□ -2.27
Ccdc88bQ4QRL3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 AC132384.9-201ENSMUST00000218085 277 ntBASIC0.89□□□□□ -2.27
Ccdc88bQ4QRL3 Gm11389-201ENSMUST00000121407 430 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 Mir5101-201ENSMUST00000175181 83 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 Gm43228-201ENSMUST00000200735 264 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 Gm10298-201ENSMUST00000074801 265 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.88□□□□□ -2.27
Ccdc88bQ4QRL3 Gm14868-201ENSMUST00000117840 216 ntBASIC0.87□□□□□ -2.27
Ccdc88bQ4QRL3 Gm29516-201ENSMUST00000190402 468 ntBASIC0.87□□□□□ -2.27
Ccdc88bQ4QRL3 Gm3867-201ENSMUST00000086108 279 ntBASIC0.87□□□□□ -2.27
Ccdc88bQ4QRL3 Gm24126-201ENSMUST00000104111 106 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm14049-201ENSMUST00000121009 636 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm22537-201ENSMUST00000158172 199 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm29641-201ENSMUST00000188955 259 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm2446-201ENSMUST00000220144 772 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 AC124524.1-201ENSMUST00000225833 181 ntBASIC0.86□□□□□ -2.27
Ccdc88bQ4QRL3 Gm14731-201ENSMUST00000119216 376 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm26960-201ENSMUST00000182263 412 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Mir6393-201ENSMUST00000183709 94 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm28912-201ENSMUST00000189001 234 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm43245-201ENSMUST00000197603 468 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm42438-201ENSMUST00000197832 974 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm44910-201ENSMUST00000208451 396 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm18854-201ENSMUST00000211196 329 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Gm24805-201ENSMUST00000082931 104 ntBASIC0.85□□□□□ -2.27
Ccdc88bQ4QRL3 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 Gm5731-201ENSMUST00000190969 481 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 Gm44274-201ENSMUST00000203417 256 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 Mir300-201ENSMUST00000083485 79 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 Mir103-2-201ENSMUST00000083629 86 ntBASIC0.84□□□□□ -2.28
Ccdc88bQ4QRL3 Gm26105-201ENSMUST00000157253 190 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Gm24965-201ENSMUST00000157922 106 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Gm18551-201ENSMUST00000195594 642 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.83□□□□□ -2.28
Ccdc88bQ4QRL3 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm14915-201ENSMUST00000120747 204 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25718-201ENSMUST00000158632 118 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm17119-201ENSMUST00000163943 280 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25936-201ENSMUST00000179952 114 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm37361-201ENSMUST00000194345 132 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 AC113031.2-201ENSMUST00000226132 579 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25856-201ENSMUST00000082786 75 ntBASIC0.82□□□□□ -2.28
Ccdc88bQ4QRL3 Mir653-201ENSMUST00000102402 85 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm13359-201ENSMUST00000119000 695 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25108-201ENSMUST00000122473 78 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25961-201ENSMUST00000157174 135 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm381-201ENSMUST00000117443 2037 ntBASIC0.81□□□□□ -2.28
Ccdc88bQ4QRL3 Gm29231-201ENSMUST00000179850 319 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm20832-201ENSMUST00000189076 665 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm36728-201ENSMUST00000195782 665 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 AC165284.1-201ENSMUST00000228614 458 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm13246-201ENSMUST00000120994 315 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm16162-201ENSMUST00000162296 297 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm21147-201ENSMUST00000186046 913 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm24152-201ENSMUST00000082764 163 ntBASIC0.8□□□□□ -2.28
Ccdc88bQ4QRL3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.79□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25110-201ENSMUST00000116684 121 ntBASIC0.79□□□□□ -2.28
Ccdc88bQ4QRL3 Gm25775-201ENSMUST00000116716 121 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms