Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm18588-201ENSMUST00000177308 492 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm25314-201ENSMUST00000178810 79 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Mir7242-201ENSMUST00000183710 79 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm29134-201ENSMUST00000186579 126 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm29350-201ENSMUST00000189141 541 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm28337-201ENSMUST00000190425 666 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm36866-201ENSMUST00000193343 657 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm36047-201ENSMUST00000193659 657 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm20857-201ENSMUST00000194766 657 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm20858-201ENSMUST00000195459 657 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm23454-201ENSMUST00000083332 133 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 AF357428-201ENSMUST00000083815 69 ntBASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trim40Q3UWA4 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm25500-201ENSMUST00000104426 123 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm14823-201ENSMUST00000117698 238 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm11386-201ENSMUST00000117761 347 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm25292-201ENSMUST00000122797 322 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm23411-201ENSMUST00000157988 62 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm22257-201ENSMUST00000158687 301 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm17166-201ENSMUST00000172006 431 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm22131-201ENSMUST00000178415 94 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm23186-201ENSMUST00000180078 107 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Mir6975-201ENSMUST00000184879 61 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm28506-201ENSMUST00000189937 150 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm18341-201ENSMUST00000197538 622 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm45402-201ENSMUST00000211796 223 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim40Q3UWA4 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.4□□□□□ -2.02
Trim40Q3UWA4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
Trim40Q3UWA4 Gm22656-201ENSMUST00000104199 171 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm14355-201ENSMUST00000117352 264 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm12513-201ENSMUST00000118617 352 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm14852-201ENSMUST00000120065 647 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm12693-201ENSMUST00000121965 483 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm14333-201ENSMUST00000130484 264 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm23752-201ENSMUST00000157584 115 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm24879-201ENSMUST00000158386 143 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm37037-201ENSMUST00000194475 424 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm44336-201ENSMUST00000203696 468 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Mir10a-201ENSMUST00000083585 110 ntBASIC2.4□□□□□ -2.03
Trim40Q3UWA4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm11065-201ENSMUST00000111462 228 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm6954-201ENSMUST00000117416 225 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm23168-201ENSMUST00000157156 143 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm24138-201ENSMUST00000157572 114 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm23016-201ENSMUST00000158431 62 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm22136-201ENSMUST00000158751 268 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm16232-201ENSMUST00000162856 167 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm19932-201ENSMUST00000177033 313 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm28000-201ENSMUST00000184380 85 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm18291-201ENSMUST00000190791 301 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms