Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Gm23517-201ENSMUST00000082830 192 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Gm23443-201ENSMUST00000082916 128 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Gm22868-201ENSMUST00000083955 164 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Limch1Q3UH68 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Limch1Q3UH68 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.51□□□□□ -1.69
Limch1Q3UH68 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Limch1Q3UH68 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm25720-201ENSMUST00000157503 105 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm24392-201ENSMUST00000158136 103 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm24553-201ENSMUST00000158653 131 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm24667-201ENSMUST00000158938 103 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm6625-201ENSMUST00000177870 272 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Mir6383-201ENSMUST00000184545 116 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm7182-201ENSMUST00000193351 732 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm44099-201ENSMUST00000203299 112 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm45553-201ENSMUST00000209929 507 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm9818-201ENSMUST00000050900 255 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm23454-201ENSMUST00000083332 133 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Limch1Q3UH68 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.5□□□□□ -1.69
Limch1Q3UH68 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm25727-201ENSMUST00000104522 131 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm26476-201ENSMUST00000122618 313 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm24006-201ENSMUST00000158462 132 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm22889-201ENSMUST00000158639 58 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Spin2g-201ENSMUST00000178425 687 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm27476-201ENSMUST00000183366 104 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Mir6385-201ENSMUST00000184295 105 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm37417-201ENSMUST00000195257 454 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm35857-201ENSMUST00000212739 178 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Gm25481-201ENSMUST00000083221 158 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.49□□□□□ -1.69
Limch1Q3UH68 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Limch1Q3UH68 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm24982-201ENSMUST00000104456 132 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm22321-201ENSMUST00000157152 104 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm27465-201ENSMUST00000184290 91 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Mir193a-201ENSMUST00000083461 66 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm24817-201ENSMUST00000093672 105 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.48□□□□□ -1.69
Limch1Q3UH68 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Limch1Q3UH68 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm23002-201ENSMUST00000179221 107 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm25024-201ENSMUST00000179667 104 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Mir6540-201ENSMUST00000184886 108 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm37997-201ENSMUST00000193515 267 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms