Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm23803-201ENSMUST00000104610 132 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm13913-201ENSMUST00000121126 260 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm6568-201ENSMUST00000122274 697 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm25318-201ENSMUST00000122554 314 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm23642-201ENSMUST00000157858 258 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm25863-201ENSMUST00000158249 329 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Mir1927-201ENSMUST00000158579 109 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm9071-201ENSMUST00000165915 474 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Cfap61-214ENSMUST00000167179 183 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm24518-201ENSMUST00000180275 94 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm27660-201ENSMUST00000184028 208 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm18964-201ENSMUST00000193013 563 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm9174-201ENSMUST00000078149 255 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm25853-201ENSMUST00000082793 132 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.38□□□□□ -2.03
Trafd1Q3UDK1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Mir542-201ENSMUST00000102186 85 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm12191-201ENSMUST00000118307 348 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm9703-201ENSMUST00000119573 343 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm14392-201ENSMUST00000120332 401 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm14413-201ENSMUST00000122158 408 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm14530-201ENSMUST00000122391 333 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm25220-201ENSMUST00000157546 95 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm16289-201ENSMUST00000162079 183 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm25476-201ENSMUST00000175125 185 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm21754-201ENSMUST00000177550 479 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm27490-201ENSMUST00000184754 128 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm28755-201ENSMUST00000185773 199 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Trbv24-201ENSMUST00000194614 347 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Rny3-201ENSMUST00000083011 102 ntBASIC2.37□□□□□ -2.03
Trafd1Q3UDK1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm22831-201ENSMUST00000102473 109 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm15223-201ENSMUST00000120989 826 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm17065-201ENSMUST00000165245 239 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm17186-201ENSMUST00000171742 456 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Mir6338-201ENSMUST00000183389 109 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm27845-201ENSMUST00000184479 114 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm29184-201ENSMUST00000190038 334 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm37119-201ENSMUST00000195691 389 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm26446-201ENSMUST00000082455 103 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.36□□□□□ -2.03
Trafd1Q3UDK1 Gm381-201ENSMUST00000117443 2037 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm22496-201ENSMUST00000104493 88 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm13728-201ENSMUST00000117471 400 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm15106-201ENSMUST00000119691 821 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm11785-201ENSMUST00000120165 601 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm14638-201ENSMUST00000121338 216 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm13424-201ENSMUST00000122301 354 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm12443-201ENSMUST00000122308 323 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm23332-201ENSMUST00000157424 275 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm24757-201ENSMUST00000176987 371 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm25175-201ENSMUST00000178712 79 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm24168-201ENSMUST00000178825 107 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm9022-202ENSMUST00000183285 483 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms