Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.82□□□□□ -1.64
Rnf40Q3U319 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.82□□□□□ -1.64
Rnf40Q3U319 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm22592-201ENSMUST00000104242 131 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm24716-201ENSMUST00000157524 104 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm44330-201ENSMUST00000200106 143 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm23330-201ENSMUST00000082660 164 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf40Q3U319 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.81□□□□□ -1.64
Rnf40Q3U319 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf40Q3U319 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm5391-201ENSMUST00000121155 613 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm23669-201ENSMUST00000157470 128 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Mir6416-201ENSMUST00000183664 117 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm43587-201ENSMUST00000199590 204 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 AC134601.1-201ENSMUST00000221058 109 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm25006-201ENSMUST00000083813 107 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf40Q3U319 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.8□□□□□ -1.64
Rnf40Q3U319 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm24429-201ENSMUST00000104076 132 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm13867-201ENSMUST00000120844 395 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm23799-201ENSMUST00000175559 120 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm28000-201ENSMUST00000184380 85 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm27457-201ENSMUST00000184771 156 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm28830-201ENSMUST00000188192 213 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm23370-202ENSMUST00000197008 129 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm43324-201ENSMUST00000197482 289 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Mir219c-201ENSMUST00000199860 60 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm44054-201ENSMUST00000203814 372 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Mecom-201ENSMUST00000061088 348 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm25851-201ENSMUST00000082794 107 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Mir202-201ENSMUST00000083568 72 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm25682-201ENSMUST00000083942 164 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.79□□□□□ -1.64
Rnf40Q3U319 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf40Q3U319 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf40Q3U319 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm24170-201ENSMUST00000104124 133 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm13761-201ENSMUST00000117238 807 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm11790-201ENSMUST00000119569 455 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm13533-201ENSMUST00000121104 177 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm27541-201ENSMUST00000184078 122 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm37097-201ENSMUST00000193676 336 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm37882-201ENSMUST00000195254 196 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm43680-201ENSMUST00000199466 340 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm19786-201ENSMUST00000222589 580 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm22421-201ENSMUST00000083058 107 ntBASIC4.78□□□□□ -1.64
Rnf40Q3U319 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf40Q3U319 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf40Q3U319 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf40Q3U319 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Rnf40Q3U319 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Rnf40Q3U319 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf40Q3U319 Gm14020-201ENSMUST00000118165 662 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 Gm6952-201ENSMUST00000118629 159 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 Gm14586-201ENSMUST00000119571 408 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 Gm15428-201ENSMUST00000121352 333 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 Mir3062-201ENSMUST00000174986 105 ntBASIC4.77□□□□□ -1.65
Rnf40Q3U319 Mir3080-201ENSMUST00000175010 79 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms