Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm44161-201ENSMUST00000203532 253 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm43955-201ENSMUST00000204332 142 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm45380-201ENSMUST00000210465 315 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.96□□□□□ -1.77
Ddb1Q3U1J4 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.96□□□□□ -1.77
Ddb1Q3U1J4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm14897-201ENSMUST00000118213 207 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm22611-201ENSMUST00000158288 150 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm24358-201ENSMUST00000158424 288 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm27445-201ENSMUST00000184484 72 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm27624-201ENSMUST00000185047 177 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm29429-201ENSMUST00000187071 121 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm28408-201ENSMUST00000191557 463 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm25207-201ENSMUST00000093745 107 ntBASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ddb1Q3U1J4 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm14269-201ENSMUST00000120455 306 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm13153-201ENSMUST00000120969 637 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm12924-201ENSMUST00000121747 318 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm23213-201ENSMUST00000122715 313 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm24504-201ENSMUST00000157679 100 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm7953-201ENSMUST00000168278 469 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm43651-201ENSMUST00000199796 439 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm19252-201ENSMUST00000204705 305 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm44794-201ENSMUST00000206550 411 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm45119-201ENSMUST00000207612 199 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm45704-201ENSMUST00000212582 403 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm2829-201ENSMUST00000213121 499 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm10025-201ENSMUST00000079568 372 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Snord68-201ENSMUST00000082516 86 ntBASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ddb1Q3U1J4 Gm22782-201ENSMUST00000104082 132 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm23911-201ENSMUST00000104596 134 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm13343-201ENSMUST00000116474 105 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm11577-201ENSMUST00000118030 737 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm11456-201ENSMUST00000121070 256 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm22675-201ENSMUST00000158430 104 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm22500-201ENSMUST00000158982 99 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm20542-201ENSMUST00000174582 372 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm23268-201ENSMUST00000175494 78 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm20698-201ENSMUST00000175657 233 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Mir6335-201ENSMUST00000184081 98 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Mir6905-201ENSMUST00000184228 70 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm28058-201ENSMUST00000186421 264 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm37128-201ENSMUST00000192599 232 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm44030-201ENSMUST00000204865 432 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm25581-201ENSMUST00000083410 164 ntBASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.94□□□□□ -1.78
Ddb1Q3U1J4 Gm650-201ENSMUST00000144428 1551 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm26156-201ENSMUST00000116999 123 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm14919-201ENSMUST00000120839 390 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm7327-201ENSMUST00000120925 652 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm22037-201ENSMUST00000157280 296 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm23579-201ENSMUST00000158528 103 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm28717-201ENSMUST00000189950 315 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Mir3970-201ENSMUST00000199287 90 ntBASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ddb1Q3U1J4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms