Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm7853-201ENSMUST00000100708 478 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Mir701-201ENSMUST00000102208 109 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm24867-201ENSMUST00000104161 107 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm11367-201ENSMUST00000117802 120 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm12721-201ENSMUST00000120621 268 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm13424-201ENSMUST00000122301 354 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Trav20-201ENSMUST00000142754 347 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm23084-201ENSMUST00000157850 114 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm20534-201ENSMUST00000172957 172 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm25235-201ENSMUST00000179933 107 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Mir195b-201ENSMUST00000184814 97 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm29452-201ENSMUST00000187996 313 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm44349-201ENSMUST00000197048 123 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm44473-201ENSMUST00000204039 152 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm44977-201ENSMUST00000205283 420 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Gm24147-201ENSMUST00000082763 144 ntBASIC3.5□□□□□ -1.85
Usp39Q3TIX9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Usp39Q3TIX9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm12191-201ENSMUST00000118307 348 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm15613-201ENSMUST00000118396 326 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm9703-201ENSMUST00000119573 343 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm24630-201ENSMUST00000122768 106 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm23865-201ENSMUST00000157723 97 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm23557-201ENSMUST00000157820 138 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm27510-201ENSMUST00000158214 64 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm24930-201ENSMUST00000158315 83 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm22531-201ENSMUST00000158819 140 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm43600-201ENSMUST00000202134 223 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm45002-201ENSMUST00000208045 120 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm45380-201ENSMUST00000210465 315 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Gm10343-201ENSMUST00000096279 348 ntBASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Usp39Q3TIX9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm13457-201ENSMUST00000117885 267 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm14687-201ENSMUST00000120206 363 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm12897-201ENSMUST00000120341 250 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm12276-201ENSMUST00000121709 301 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm25977-201ENSMUST00000158697 85 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm20542-201ENSMUST00000174582 372 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm28314-201ENSMUST00000191276 345 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Mir7661-201ENSMUST00000197023 61 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm44208-201ENSMUST00000205199 421 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm45296-201ENSMUST00000209625 205 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Usp39Q3TIX9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.47□□□□□ -1.85
Usp39Q3TIX9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Usp39Q3TIX9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
Usp39Q3TIX9 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.47□□□□□ -1.85
Usp39Q3TIX9 Gm13076-201ENSMUST00000118041 204 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms