Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.42□□□□□ -1.86
Col8a1Q00780 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col8a1Q00780 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col8a1Q00780 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm14649-201ENSMUST00000121814 324 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm23184-201ENSMUST00000122594 131 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm22027-201ENSMUST00000122737 127 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm25283-201ENSMUST00000157272 77 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm29218-205ENSMUST00000190846 615 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm43586-201ENSMUST00000195948 310 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm43193-201ENSMUST00000197732 441 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.41□□□□□ -1.86
Col8a1Q00780 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm7065-201ENSMUST00000222150 474 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Snord21-201ENSMUST00000082519 94 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm23517-201ENSMUST00000082830 192 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Mir370-201ENSMUST00000083499 79 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm22154-201ENSMUST00000083844 131 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.41□□□□□ -1.86
Col8a1Q00780 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col8a1Q00780 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col8a1Q00780 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col8a1Q00780 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.4□□□□□ -1.86
Col8a1Q00780 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.4□□□□□ -1.86
Col8a1Q00780 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col8a1Q00780 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.4□□□□□ -1.86
Col8a1Q00780 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col8a1Q00780 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23472-201ENSMUST00000101806 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm11204-201ENSMUST00000122438 147 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm26187-201ENSMUST00000157693 101 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm24131-201ENSMUST00000158539 107 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm22135-201ENSMUST00000158752 108 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm22531-201ENSMUST00000158819 140 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm24497-201ENSMUST00000177868 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm28591-201ENSMUST00000185259 183 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Mir376a-201ENSMUST00000197584 68 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm44600-201ENSMUST00000208540 111 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm45317-201ENSMUST00000210385 223 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm25813-201ENSMUST00000082748 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm24950-201ENSMUST00000082768 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23444-201ENSMUST00000082922 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23239-201ENSMUST00000083006 181 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm25200-201ENSMUST00000083094 130 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23297-201ENSMUST00000083184 127 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23971-201ENSMUST00000083317 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23095-201ENSMUST00000083446 107 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Mir302d-201ENSMUST00000083513 66 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm23849-201ENSMUST00000083833 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm26316-201ENSMUST00000083886 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col8a1Q00780 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col8a1Q00780 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.4□□□□□ -1.87
Col8a1Q00780 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col8a1Q00780 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Mir466p-201ENSMUST00000103925 89 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm24172-201ENSMUST00000104127 117 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm13076-201ENSMUST00000118041 204 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm13873-201ENSMUST00000119208 427 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm23982-201ENSMUST00000157141 106 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm22098-201ENSMUST00000157930 85 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Mir1934-201ENSMUST00000158127 83 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm26028-201ENSMUST00000158660 294 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Mir7081-201ENSMUST00000184490 75 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm28148-201ENSMUST00000186924 697 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm18956-201ENSMUST00000192857 480 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm30341-201ENSMUST00000194363 289 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm44470-201ENSMUST00000203913 142 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms