Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm14652-201ENSMUST00000118479 235 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm14766-201ENSMUST00000121689 367 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm14770-201ENSMUST00000122197 312 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm2830-201ENSMUST00000140330 385 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm26280-201ENSMUST00000157096 101 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm24769-201ENSMUST00000158506 129 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm17072-201ENSMUST00000166673 658 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm26991-201ENSMUST00000180950 620 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm43529-201ENSMUST00000199178 412 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.03□□□□□ -2.08
Ufd1P70362 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ufd1P70362 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm23093-201ENSMUST00000083450 102 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Mir10a-201ENSMUST00000083585 110 ntBASIC2.03□□□□□ -2.08
Ufd1P70362 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ufd1P70362 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ufd1P70362 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ufd1P70362 Gm14894-201ENSMUST00000117170 270 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm12458-201ENSMUST00000119387 495 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm13720-201ENSMUST00000120741 196 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm12819-201ENSMUST00000122223 629 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm22554-201ENSMUST00000157798 147 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm22389-201ENSMUST00000158193 301 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm24210-201ENSMUST00000158263 133 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm24771-201ENSMUST00000158508 137 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm25977-201ENSMUST00000158697 85 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm22527-201ENSMUST00000158816 106 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm3470-201ENSMUST00000160819 420 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm29335-201ENSMUST00000188361 459 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm28151-201ENSMUST00000189404 951 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm37449-201ENSMUST00000193016 270 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm18658-201ENSMUST00000195558 270 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm44118-201ENSMUST00000204665 229 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.02□□□□□ -2.09
Ufd1P70362 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.02□□□□□ -2.09
Ufd1P70362 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Gm9762-201ENSMUST00000036976 444 ntBASIC2.02□□□□□ -2.09
Ufd1P70362 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ufd1P70362 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ufd1P70362 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ufd1P70362 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ufd1P70362 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm24582-201ENSMUST00000103967 103 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.01□□□□□ -2.09
Ufd1P70362 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.01□□□□□ -2.09
Ufd1P70362 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm26474-201ENSMUST00000116762 122 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm14551-201ENSMUST00000120802 256 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm12872-201ENSMUST00000121835 320 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm25325-201ENSMUST00000122559 86 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm23184-201ENSMUST00000122594 131 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm22141-201ENSMUST00000157403 277 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm24438-201ENSMUST00000157893 115 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm25163-201ENSMUST00000158905 104 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm23268-201ENSMUST00000175494 78 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm24418-201ENSMUST00000177597 79 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm24304-201ENSMUST00000177635 107 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm24639-201ENSMUST00000178518 79 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm23076-201ENSMUST00000179082 79 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm25077-201ENSMUST00000179157 79 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm23379-201ENSMUST00000180026 107 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm27919-201ENSMUST00000185163 107 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm28597-201ENSMUST00000187664 666 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm29950-201ENSMUST00000195273 237 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm8747-201ENSMUST00000195392 751 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm9377-201ENSMUST00000207227 623 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.01□□□□□ -2.09
Ufd1P70362 Gm23040-201ENSMUST00000083869 163 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm26108-201ENSMUST00000083973 191 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.01□□□□□ -2.09
Ufd1P70362 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.01□□□□□ -2.09
Ufd1P70362 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ufd1P70362 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ufd1P70362 Gm23128-201ENSMUST00000104257 132 ntBASIC2□□□□□ -2.09
Ufd1P70362 Gm12779-201ENSMUST00000121496 143 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms