Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm37836-201ENSMUST00000195875 175 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Gm43155-201ENSMUST00000202661 494 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Gm18000-201ENSMUST00000212153 800 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.54□□□□□ -1.68
Rfx1P48377 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.54□□□□□ -1.68
Rfx1P48377 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Gm9795-201ENSMUST00000062156 693 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rfx1P48377 Gm25200-201ENSMUST00000083094 130 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Gm23453-201ENSMUST00000083326 106 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.54□□□□□ -1.68
Rfx1P48377 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm23063-201ENSMUST00000102350 93 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rfx1P48377 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Rfx1P48377 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm23988-201ENSMUST00000117034 122 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm23760-201ENSMUST00000158350 116 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm22433-201ENSMUST00000158550 142 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm24739-201ENSMUST00000158855 292 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.53□□□□□ -1.68
Rfx1P48377 Gm28848-201ENSMUST00000189984 168 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm44337-201ENSMUST00000196553 114 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm17951-201ENSMUST00000198536 496 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.53□□□□□ -1.68
Rfx1P48377 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Gm24152-201ENSMUST00000082764 163 ntBASIC4.53□□□□□ -1.68
Rfx1P48377 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Rfx1P48377 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Rfx1P48377 Gm24096-201ENSMUST00000103905 110 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm14971-201ENSMUST00000117980 663 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm13541-201ENSMUST00000119519 283 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm14846-201ENSMUST00000121868 216 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.52□□□□□ -1.69
Rfx1P48377 Gm23234-201ENSMUST00000157304 134 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm23892-201ENSMUST00000158105 130 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm25369-201ENSMUST00000158848 132 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm26460-201ENSMUST00000175061 126 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm22118-201ENSMUST00000175593 171 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm20660-201ENSMUST00000177515 289 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm24308-201ENSMUST00000177773 114 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm26200-201ENSMUST00000180273 79 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm27869-201ENSMUST00000184327 122 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm27545-201ENSMUST00000184755 202 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm29479-201ENSMUST00000190352 455 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm3829-201ENSMUST00000222362 619 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm23850-201ENSMUST00000083830 169 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Rfx1P48377 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Rfx1P48377 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.52□□□□□ -1.69
Rfx1P48377 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Rfx1P48377 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Rfx1P48377 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm14688-201ENSMUST00000119169 303 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm15986-201ENSMUST00000122153 400 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm25177-201ENSMUST00000122634 117 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm25392-201ENSMUST00000157335 297 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm26287-201ENSMUST00000158887 81 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm27834-201ENSMUST00000183427 125 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.51□□□□□ -1.69
Rfx1P48377 Gm29774-201ENSMUST00000219270 436 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm23518-201ENSMUST00000082835 153 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Snora31-201ENSMUST00000083213 130 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Gm25481-201ENSMUST00000083221 158 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Rfx1P48377 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.51□□□□□ -1.69
Rfx1P48377 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Rfx1P48377 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Rfx1P48377 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Rfx1P48377 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Rfx1P48377 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Rfx1P48377 Mir1193-201ENSMUST00000116761 121 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm13432-201ENSMUST00000118861 241 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm13419-201ENSMUST00000121711 271 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm23331-201ENSMUST00000157423 108 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm24726-201ENSMUST00000158232 121 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rfx1P48377 Gm6625-201ENSMUST00000177870 272 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm37923-201ENSMUST00000191624 161 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm37670-201ENSMUST00000193622 229 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.5□□□□□ -1.69
Rfx1P48377 Gm43441-201ENSMUST00000201458 205 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rfx1P48377 Gm45553-201ENSMUST00000209929 507 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms