Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm38329-201ENSMUST00000193473 427 ntBASIC0.48□□□□□ -2.33
HttP42859 Gm18854-201ENSMUST00000211196 329 ntBASIC0.48□□□□□ -2.33
HttP42859 Gm22151-201ENSMUST00000116963 58 ntBASIC0.47□□□□□ -2.33
HttP42859 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm23983-201ENSMUST00000157142 114 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm23505-201ENSMUST00000158989 130 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm24813-201ENSMUST00000175310 84 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm25198-201ENSMUST00000178574 110 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm8676-201ENSMUST00000184206 637 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm24431-201ENSMUST00000104073 66 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm22633-201ENSMUST00000179834 107 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm6060-201ENSMUST00000188671 251 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm18691-201ENSMUST00000203593 872 ntBASIC0.47□□□□□ -2.33
HttP42859 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm25526-201ENSMUST00000104332 132 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm25544-201ENSMUST00000122676 120 ntBASIC0.47□□□□□ -2.33
HttP42859 Gm27025-201ENSMUST00000182392 942 ntBASIC0.47□□□□□ -2.33
HttP42859 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC0.47□□□□□ -2.33
HttP42859 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HttP42859 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
HttP42859 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
HttP42859 Mir487b-201ENSMUST00000102265 82 ntBASIC0.46□□□□□ -2.34
HttP42859 Gm22107-201ENSMUST00000122548 100 ntBASIC0.46□□□□□ -2.34
HttP42859 Gm25520-201ENSMUST00000158389 118 ntBASIC0.46□□□□□ -2.34
HttP42859 Gm45791-201ENSMUST00000212908 352 ntBASIC0.46□□□□□ -2.34
HttP42859 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC0.46□□□□□ -2.34
HttP42859 Gm19563-201ENSMUST00000222031 270 ntBASIC0.46□□□□□ -2.34
HttP42859 Olfr197-201ENSMUST00000080031 926 ntBASIC0.46□□□□□ -2.34
HttP42859 Gm25162-201ENSMUST00000158906 159 ntBASIC0.46□□□□□ -2.34
HttP42859 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HttP42859 Gm22037-201ENSMUST00000157280 296 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm27711-201ENSMUST00000183802 118 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC0.45□□□□□ -2.34
HttP42859 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC0.45□□□□□ -2.34
HttP42859 Gm44559-201ENSMUST00000207177 1012 ntBASIC0.45□□□□□ -2.34
HttP42859 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.45□□□□□ -2.34
HttP42859 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HttP42859 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HttP42859 Mir32-201ENSMUST00000083610 70 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
HttP42859 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HttP42859 Gm12837-201ENSMUST00000120131 373 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm22537-201ENSMUST00000158172 199 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm25802-201ENSMUST00000082639 77 ntBASIC0.45□□□□□ -2.34
HttP42859 Gm16186-201ENSMUST00000120132 216 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.44□□□□□ -2.34
HttP42859 Gm25718-201ENSMUST00000158632 118 ntBASIC0.44□□□□□ -2.34
HttP42859 Mir1966-201ENSMUST00000158807 108 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm25368-201ENSMUST00000158847 131 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
HttP42859 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC0.44□□□□□ -2.34
HttP42859 Gm14885-201ENSMUST00000117969 496 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm11322-201ENSMUST00000118095 435 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm14731-201ENSMUST00000119216 376 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm23886-201ENSMUST00000122684 313 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm27582-201ENSMUST00000184084 126 ntBASIC0.44□□□□□ -2.34
HttP42859 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm44349-201ENSMUST00000197048 123 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm10264-201ENSMUST00000220589 429 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm37761-201ENSMUST00000194989 2098 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm15110-201ENSMUST00000117545 881 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm11784-201ENSMUST00000118568 474 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.44□□□□□ -2.34
HttP42859 Snora3-201ENSMUST00000083082 132 ntBASIC0.44□□□□□ -2.34
HttP42859 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
HttP42859 Gm26101-201ENSMUST00000157246 105 ntBASIC0.43□□□□□ -2.34
HttP42859 Gm23207-201ENSMUST00000158665 102 ntBASIC0.43□□□□□ -2.34
HttP42859 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.43□□□□□ -2.34
HttP42859 Gm20118-201ENSMUST00000187207 162 ntBASIC0.43□□□□□ -2.34
HttP42859 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC0.43□□□□□ -2.34
HttP42859 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.43□□□□□ -2.34
HttP42859 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
HttP42859 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
HttP42859 Gm22270-201ENSMUST00000104034 132 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm15215-201ENSMUST00000117773 489 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm25283-201ENSMUST00000157272 77 ntBASIC0.42□□□□□ -2.34
HttP42859 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.42□□□□□ -2.34
HttP42859 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.42□□□□□ -2.34
HttP42859 Gm45658-201ENSMUST00000209197 580 ntBASIC0.42□□□□□ -2.34
HttP42859 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.42□□□□□ -2.34
HttP42859 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.42□□□□□ -2.34
HttP42859 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm24271-201ENSMUST00000102327 111 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm26011-201ENSMUST00000104410 104 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm14073-201ENSMUST00000117344 381 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm15692-201ENSMUST00000152173 352 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC0.42□□□□□ -2.34
HttP42859 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.42□□□□□ -2.34
HttP42859 Gm14748-201ENSMUST00000119819 411 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm14049-201ENSMUST00000121009 636 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm29011-201ENSMUST00000191059 712 ntBASIC0.42□□□□□ -2.34
HttP42859 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HttP42859 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC0.42□□□□□ -2.34
HttP42859 Gm23623-201ENSMUST00000082461 107 ntBASIC0.42□□□□□ -2.34
HttP42859 Gm24152-201ENSMUST00000082764 163 ntBASIC0.42□□□□□ -2.34
HttP42859 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
HttP42859 Gm11284-201ENSMUST00000121910 1887 ntBASIC0.41□□□□□ -2.34
HttP42859 Gm14008-201ENSMUST00000120483 274 ntBASIC0.41□□□□□ -2.34
HttP42859 Gm11965-201ENSMUST00000122017 277 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms