Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Traf1P39428 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.89□□□□□ -1.95
Traf1P39428 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.89□□□□□ -1.95
Traf1P39428 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.89□□□□□ -1.95
Traf1P39428 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Traf1P39428 Gm25586-201ENSMUST00000082499 112 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm26228-201ENSMUST00000082512 107 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm25080-201ENSMUST00000082526 107 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Gm25518-201ENSMUST00000083864 107 ntBASIC2.89□□□□□ -1.95
Traf1P39428 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Traf1P39428 Gm23429-201ENSMUST00000122486 149 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm23599-201ENSMUST00000157261 251 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm24911-201ENSMUST00000157292 136 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.88□□□□□ -1.95
Traf1P39428 Gm23963-201ENSMUST00000179603 77 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm28356-202ENSMUST00000187566 858 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm20885-201ENSMUST00000190192 654 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm18296-201ENSMUST00000192475 783 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm37771-201ENSMUST00000193121 265 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm36866-201ENSMUST00000193343 657 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm36047-201ENSMUST00000193659 657 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm20857-201ENSMUST00000194766 657 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm20858-201ENSMUST00000195459 657 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm43007-201ENSMUST00000197618 291 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm42739-201ENSMUST00000200687 226 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Gm45013-201ENSMUST00000206883 178 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Traf1P39428 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.88□□□□□ -1.95
Traf1P39428 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.88□□□□□ -1.95
Traf1P39428 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Traf1P39428 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Traf1P39428 Gm22572-201ENSMUST00000082985 105 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Snord38a-201ENSMUST00000083746 71 ntBASIC2.88□□□□□ -1.95
Traf1P39428 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Traf1P39428 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Traf1P39428 Gm13756-201ENSMUST00000117618 222 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm12053-201ENSMUST00000119022 252 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm23124-201ENSMUST00000157650 107 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm25866-201ENSMUST00000158245 112 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm15914-201ENSMUST00000161922 309 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm8292-201ENSMUST00000162574 396 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm8532-201ENSMUST00000179174 461 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm28825-201ENSMUST00000186233 238 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm23370-202ENSMUST00000197008 129 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm8940-201ENSMUST00000212585 219 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Gm18774-201ENSMUST00000218269 601 ntBASIC2.87□□□□□ -1.95
Traf1P39428 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.87□□□□□ -1.95
Traf1P39428 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Traf1P39428 Olfr197-201ENSMUST00000080031 926 ntBASIC2.87□□□□□ -1.95
Traf1P39428 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Traf1P39428 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Traf1P39428 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Traf1P39428 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.86□□□□□ -1.95
Traf1P39428 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Traf1P39428 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Traf1P39428 Gm24889-201ENSMUST00000104388 132 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm22771-201ENSMUST00000104449 91 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm12806-201ENSMUST00000119384 268 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm24168-201ENSMUST00000178825 107 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm27660-201ENSMUST00000184028 208 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm27761-201ENSMUST00000184091 131 ntBASIC2.86□□□□□ -1.95
Traf1P39428 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Traf1P39428 Gm28404-201ENSMUST00000190242 453 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Trbv22-201ENSMUST00000191697 291 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm37869-201ENSMUST00000193385 595 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.86□□□□□ -1.95
Traf1P39428 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.86□□□□□ -1.95
Traf1P39428 Gm44459-201ENSMUST00000203926 160 ntBASIC2.86□□□□□ -1.95
Traf1P39428 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Traf1P39428 Gm22443-201ENSMUST00000082890 107 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Snord14d-201ENSMUST00000083424 86 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Gm26327-201ENSMUST00000093724 111 ntBASIC2.86□□□□□ -1.95
Traf1P39428 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Traf1P39428 Snora36b-201ENSMUST00000104383 132 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm14579-201ENSMUST00000117068 283 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm15714-201ENSMUST00000117168 250 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm12765-201ENSMUST00000117273 615 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm15183-201ENSMUST00000118933 348 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm23867-201ENSMUST00000122649 274 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm16218-201ENSMUST00000155424 388 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm24212-201ENSMUST00000158258 132 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm22517-201ENSMUST00000158265 136 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm24878-201ENSMUST00000158782 104 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm23005-201ENSMUST00000158950 136 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm25243-201ENSMUST00000174912 207 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm6660-201ENSMUST00000179149 468 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm22631-201ENSMUST00000179656 94 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm24518-201ENSMUST00000180275 94 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Mir7050-201ENSMUST00000184636 60 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms