Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LdlrP35951 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LdlrP35951 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
LdlrP35951 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
LdlrP35951 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
LdlrP35951 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
LdlrP35951 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
LdlrP35951 Gm14810-201ENSMUST00000121628 486 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm12858-201ENSMUST00000121913 208 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm24630-201ENSMUST00000122768 106 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.53□□□□□ -1.84
LdlrP35951 Gm25967-201ENSMUST00000157168 147 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm26187-201ENSMUST00000157693 101 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm26171-201ENSMUST00000158422 131 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm22433-201ENSMUST00000158550 142 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Gm23921-201ENSMUST00000175258 107 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm27952-201ENSMUST00000184748 105 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm44473-201ENSMUST00000204039 152 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm45513-201ENSMUST00000210228 376 ntBASIC3.53□□□□□ -1.84
LdlrP35951 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.53□□□□□ -1.84
LdlrP35951 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm18441-201ENSMUST00000223539 617 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LdlrP35951 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LdlrP35951 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.53□□□□□ -1.84
LdlrP35951 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.53□□□□□ -1.84
LdlrP35951 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LdlrP35951 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LdlrP35951 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.52□□□□□ -1.85
LdlrP35951 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LdlrP35951 Gm7853-201ENSMUST00000100708 478 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
LdlrP35951 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LdlrP35951 Gm13457-201ENSMUST00000117885 267 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm15613-201ENSMUST00000118396 326 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm14877-201ENSMUST00000119803 478 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm11785-201ENSMUST00000120165 601 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.52□□□□□ -1.85
LdlrP35951 Gm25283-201ENSMUST00000157272 77 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Mir1934-201ENSMUST00000158127 83 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm23702-201ENSMUST00000158840 130 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.52□□□□□ -1.85
LdlrP35951 Mir6336-201ENSMUST00000183581 130 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm36964-201ENSMUST00000191876 198 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm17966-201ENSMUST00000193453 594 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm45315-201ENSMUST00000209283 333 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LdlrP35951 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm26066-201ENSMUST00000083385 109 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Gm23041-201ENSMUST00000083868 106 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LdlrP35951 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.52□□□□□ -1.85
LdlrP35951 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
LdlrP35951 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LdlrP35951 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LdlrP35951 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LdlrP35951 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LdlrP35951 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LdlrP35951 Gm24831-201ENSMUST00000116778 126 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.51□□□□□ -1.85
LdlrP35951 Gm22538-201ENSMUST00000158169 299 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LdlrP35951 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.51□□□□□ -1.85
LdlrP35951 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Mir5098-201ENSMUST00000175320 82 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Mir6993-201ENSMUST00000184912 65 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm29014-201ENSMUST00000191422 326 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm9696-202ENSMUST00000191541 830 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.51□□□□□ -1.85
LdlrP35951 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm45420-201ENSMUST00000211243 425 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Snord15a-201ENSMUST00000083888 148 ntBASIC3.51□□□□□ -1.85
LdlrP35951 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LdlrP35951 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.51□□□□□ -1.85
LdlrP35951 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
LdlrP35951 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LdlrP35951 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
LdlrP35951 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LdlrP35951 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LdlrP35951 Gm23705-201ENSMUST00000104370 130 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Gm13076-201ENSMUST00000118041 204 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Gm15760-201ENSMUST00000119553 283 ntBASIC3.5□□□□□ -1.85
LdlrP35951 Gm13687-201ENSMUST00000119857 282 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms