Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm20543-201ENSMUST00000174200 726 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm25243-201ENSMUST00000174912 207 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm23619-201ENSMUST00000178411 94 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm25474-201ENSMUST00000179052 94 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm22047-201ENSMUST00000179176 94 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm11395-201ENSMUST00000181011 499 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Mir7068-201ENSMUST00000183439 74 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm27659-201ENSMUST00000183472 98 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm28900-201ENSMUST00000185232 156 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm37007-201ENSMUST00000194234 319 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm44449-201ENSMUST00000203610 153 ntBASIC2.46□□□□□ -2.02
Lire1P11260 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.46□□□□□ -2.02
Lire1P11260 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.46□□□□□ -2.02
Lire1P11260 Gm23246-201ENSMUST00000083371 67 ntBASIC2.46□□□□□ -2.02
Lire1P11260 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
Lire1P11260 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lire1P11260 Gm25500-201ENSMUST00000104426 123 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Lire1P11260 Gm13368-201ENSMUST00000122443 430 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm23381-201ENSMUST00000157676 94 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm21894-201ENSMUST00000179631 546 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Lire1P11260 Mir7232-201ENSMUST00000197929 74 ntBASIC2.45□□□□□ -2.02
Lire1P11260 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm22508-201ENSMUST00000082772 110 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm23454-201ENSMUST00000083332 133 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Gm24490-201ENSMUST00000083803 98 ntBASIC2.45□□□□□ -2.02
Lire1P11260 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lire1P11260 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm24443-201ENSMUST00000157242 132 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Mir1942-201ENSMUST00000157274 63 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm22330-201ENSMUST00000158068 115 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm24837-201ENSMUST00000158683 81 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Snord93-201ENSMUST00000175580 71 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm21885-201ENSMUST00000178891 327 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm23145-201ENSMUST00000178912 79 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm28058-201ENSMUST00000186421 264 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm28745-201ENSMUST00000190069 305 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.44□□□□□ -2.02
Lire1P11260 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.44□□□□□ -2.02
Lire1P11260 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lire1P11260 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lire1P11260 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Lire1P11260 Gm24122-201ENSMUST00000104107 132 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.43□□□□□ -2.02
Lire1P11260 Gm22389-201ENSMUST00000158193 301 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm22664-201ENSMUST00000158719 105 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lire1P11260 Mir3076-201ENSMUST00000175415 60 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm20718-201ENSMUST00000176058 259 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm19932-201ENSMUST00000177033 313 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm20660-201ENSMUST00000177515 289 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm23963-201ENSMUST00000179603 77 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.43□□□□□ -2.02
Lire1P11260 Gm37946-201ENSMUST00000192064 347 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm6059-201ENSMUST00000196903 340 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Gm44212-201ENSMUST00000205016 897 ntBASIC2.43□□□□□ -2.02
Lire1P11260 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lire1P11260 Gm26263-201ENSMUST00000083281 164 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Mir30d-201ENSMUST00000083503 82 ntBASIC2.43□□□□□ -2.02
Lire1P11260 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Lire1P11260 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lire1P11260 Gm23202-201ENSMUST00000104376 129 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lire1P11260 Gm13378-201ENSMUST00000117483 336 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm23206-201ENSMUST00000122720 184 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.42□□□□□ -2.02
Lire1P11260 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.42□□□□□ -2.02
Lire1P11260 Gm23469-201ENSMUST00000157131 104 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm22651-201ENSMUST00000157872 94 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm23223-201ENSMUST00000158119 127 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm25658-201ENSMUST00000158472 128 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Mir3075-201ENSMUST00000175340 85 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Mir28b-201ENSMUST00000175399 80 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm22633-201ENSMUST00000179834 107 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm27786-201ENSMUST00000184337 70 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm28466-201ENSMUST00000190678 659 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm37438-201ENSMUST00000192813 393 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Lire1P11260 Mir3068-202ENSMUST00000197755 79 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Mir3069-201ENSMUST00000198802 65 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.42□□□□□ -2.02
Lire1P11260 Gm20304-201ENSMUST00000218168 444 ntBASIC2.42□□□□□ -2.02
Lire1P11260 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.42□□□□□ -2.02
Lire1P11260 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.42□□□□□ -2.02
Lire1P11260 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.42□□□□□ -2.02
Lire1P11260 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.42□□□□□ -2.02
Lire1P11260 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.42□□□□□ -2.02
Lire1P11260 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lire1P11260 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
Lire1P11260 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.42□□□□□ -2.02
Lire1P11260 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Mir682-201ENSMUST00000102281 96 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms