Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Hoxd3P09027 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Hoxd3P09027 Gm15624-203ENSMUST00000204811 3402 ntBASIC3.64□□□□□ -1.83
Hoxd3P09027 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.64□□□□□ -1.83
Hoxd3P09027 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
Hoxd3P09027 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm22657-201ENSMUST00000104197 132 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Mir879-201ENSMUST00000104703 76 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm15745-201ENSMUST00000119807 115 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm25290-201ENSMUST00000122796 144 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm13092-201ENSMUST00000136346 260 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm26085-201ENSMUST00000157900 116 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17522-201ENSMUST00000178144 498 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Mir6943-201ENSMUST00000185186 66 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm43853-201ENSMUST00000197162 301 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.63□□□□□ -1.83
Hoxd3P09027 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm19786-201ENSMUST00000222589 580 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Hoxd3P09027 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Hoxd3P09027 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.63□□□□□ -1.83
Hoxd3P09027 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm11742-201ENSMUST00000119903 233 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm24774-201ENSMUST00000157384 134 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm24751-201ENSMUST00000157844 102 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm24664-201ENSMUST00000158939 100 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm27875-201ENSMUST00000184425 123 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm29613-201ENSMUST00000185846 313 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm29544-201ENSMUST00000188860 313 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm28808-201ENSMUST00000190978 313 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm10298-201ENSMUST00000074801 265 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm44433-201ENSMUST00000203540 4832 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hoxd3P09027 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.62□□□□□ -1.83
Hoxd3P09027 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm23014-201ENSMUST00000104144 130 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm22105-201ENSMUST00000116734 116 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm15120-201ENSMUST00000120602 301 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm2182-201ENSMUST00000145243 663 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm23906-201ENSMUST00000157573 128 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm22665-201ENSMUST00000158720 275 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm3145-201ENSMUST00000188584 220 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm44474-201ENSMUST00000196525 127 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm5175-202ENSMUST00000219699 529 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm25789-201ENSMUST00000083294 76 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hoxd3P09027 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hoxd3P09027 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.61□□□□□ -1.83
Hoxd3P09027 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hoxd3P09027 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hoxd3P09027 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxd3P09027 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.6□□□□□ -1.83
Hoxd3P09027 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms