Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm25579-201ENSMUST00000083407 106 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm26341-201ENSMUST00000104561 134 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm22597-201ENSMUST00000157602 80 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Gm16584-201ENSMUST00000159267 189 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Gm25412-201ENSMUST00000180258 107 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col3a1P08121 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm37746-201ENSMUST00000193249 198 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Gm43804-201ENSMUST00000198280 456 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col3a1P08121 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.07□□□□□ -1.92
Col3a1P08121 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col3a1P08121 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Snord14c-201ENSMUST00000101927 86 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm7164-201ENSMUST00000117503 450 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm14517-201ENSMUST00000119040 337 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm11388-201ENSMUST00000120908 159 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm7846-201ENSMUST00000145844 274 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.06□□□□□ -1.92
Col3a1P08121 Gm26187-201ENSMUST00000157693 101 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm25194-201ENSMUST00000177987 79 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col3a1P08121 Gm6615-201ENSMUST00000199426 631 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.06□□□□□ -1.92
Col3a1P08121 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm22508-201ENSMUST00000082772 110 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm25929-201ENSMUST00000082784 107 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col3a1P08121 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col3a1P08121 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.06□□□□□ -1.92
Col3a1P08121 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col3a1P08121 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col3a1P08121 Gm23951-201ENSMUST00000104029 132 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm13756-201ENSMUST00000117618 222 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm15244-201ENSMUST00000121122 130 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm12155-201ENSMUST00000121267 160 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col3a1P08121 Gm27579-201ENSMUST00000158113 63 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm16569-201ENSMUST00000160526 314 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Gm45173-201ENSMUST00000206819 305 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.05□□□□□ -1.92
Col3a1P08121 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col3a1P08121 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.05□□□□□ -1.92
Col3a1P08121 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col3a1P08121 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col3a1P08121 Gm14355-201ENSMUST00000117352 264 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm16017-201ENSMUST00000119834 208 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm12872-201ENSMUST00000121835 320 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm26411-201ENSMUST00000157668 107 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm20415-201ENSMUST00000172877 423 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm27028-201ENSMUST00000182303 399 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Mir7226-201ENSMUST00000184953 60 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.04□□□□□ -1.92
Col3a1P08121 Gm37377-201ENSMUST00000191733 304 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm18551-201ENSMUST00000195594 642 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm44063-201ENSMUST00000203307 376 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm19761-201ENSMUST00000205372 391 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.04□□□□□ -1.92
Col3a1P08121 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col3a1P08121 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col3a1P08121 Gm26225-201ENSMUST00000082508 135 ntBASIC3.04□□□□□ -1.92
Col3a1P08121 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col3a1P08121 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col3a1P08121 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Col3a1P08121 Mir669d-201ENSMUST00000104644 121 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm11556-201ENSMUST00000120751 288 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm13862-201ENSMUST00000121220 197 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm24499-201ENSMUST00000158446 104 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm23581-201ENSMUST00000158531 63 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms