| Hoxa3 | P02831 | Olfr644-203 | ENSMUST00000213991 | 3506 nt | APPRIS P1 TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | A430106G13Rik-201 | ENSMUST00000182158 | 3388 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Ighv3-5-201 | ENSMUST00000103479 | 299 nt | APPRIS P1 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Mir875-201 | ENSMUST00000104698 | 78 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm14518-201 | ENSMUST00000117351 | 542 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm16005-201 | ENSMUST00000120515 | 269 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm11195-201 | ENSMUST00000135030 | 441 nt | TSL 3 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm28305-201 | ENSMUST00000147249 | 365 nt | APPRIS P1 TSL 2 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm22310-201 | ENSMUST00000157509 | 116 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm23865-201 | ENSMUST00000157723 | 97 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm24730-201 | ENSMUST00000158228 | 117 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm23759-201 | ENSMUST00000158351 | 268 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm25362-201 | ENSMUST00000158854 | 105 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm17218-201 | ENSMUST00000165911 | 410 nt | TSL 3 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm20513-201 | ENSMUST00000174074 | 537 nt | TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm18520-201 | ENSMUST00000174783 | 658 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm27903-201 | ENSMUST00000175482 | 126 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm27402-201 | ENSMUST00000183890 | 120 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm27997-201 | ENSMUST00000184942 | 69 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm42621-201 | ENSMUST00000198114 | 275 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm35931-201 | ENSMUST00000203931 | 448 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm45020-201 | ENSMUST00000205356 | 381 nt | TSL 3 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm45273-201 | ENSMUST00000211559 | 281 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | AC153979.1-201 | ENSMUST00000219684 | 242 nt | TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm25480-201 | ENSMUST00000083217 | 133 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Vmn2r-ps36-201 | ENSMUST00000172589 | 2562 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm37672-201 | ENSMUST00000192682 | 4014 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm43958-201 | ENSMUST00000204360 | 3544 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm26500-201 | ENSMUST00000101867 | 106 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm24982-201 | ENSMUST00000104456 | 132 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm15896-201 | ENSMUST00000118045 | 440 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm15213-201 | ENSMUST00000122098 | 216 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm14768-201 | ENSMUST00000122126 | 678 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm23540-201 | ENSMUST00000157543 | 164 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm22654-201 | ENSMUST00000157874 | 105 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Mir1934-201 | ENSMUST00000158127 | 83 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm24314-201 | ENSMUST00000158274 | 123 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm25718-201 | ENSMUST00000158632 | 118 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm24976-201 | ENSMUST00000158972 | 135 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm16289-201 | ENSMUST00000162079 | 183 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Obox4-ps8-201 | ENSMUST00000175831 | 714 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm22308-201 | ENSMUST00000177609 | 107 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm25121-201 | ENSMUST00000179846 | 79 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Mir6355-201 | ENSMUST00000183687 | 106 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm29012-201 | ENSMUST00000187882 | 469 nt | TSL 3 BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm2719-201 | ENSMUST00000191929 | 444 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm44355-201 | ENSMUST00000200417 | 104 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Olfr1070-ps1-201 | ENSMUST00000215939 | 388 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | AC125223.1-203 | ENSMUST00000225304 | 498 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm23925-201 | ENSMUST00000082471 | 132 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm24147-201 | ENSMUST00000082763 | 144 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm22997-201 | ENSMUST00000082845 | 107 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Snora70-201 | ENSMUST00000083047 | 137 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm23041-201 | ENSMUST00000083868 | 106 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Enam-202 | ENSMUST00000199104 | 4171 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Zfp846-201 | ENSMUST00000060063 | 1626 nt | APPRIS P1 TSL 5 BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Gm15127-203 | ENSMUST00000112753 | 1950 nt | APPRIS ALT2 TSL 5 BASIC | 3.03 | □□□□□ -1.92 | | |
| Hoxa3 | P02831 | Olfr1130-202 | ENSMUST00000216580 | 2648 nt | APPRIS P1 TSL 5 BASIC | 3.03 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm37236-201 | ENSMUST00000193670 | 3249 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Sacs-203 | ENSMUST00000119943 | 14991 nt | APPRIS ALT2 TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Ccr3-201 | ENSMUST00000039171 | 3272 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Serpinb3a-202 | ENSMUST00000112717 | 1611 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Tfpi-202 | ENSMUST00000090732 | 3576 nt | TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Zfp945-205 | ENSMUST00000160457 | 6497 nt | APPRIS P4 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Postn-203 | ENSMUST00000107985 | 3205 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm23256-201 | ENSMUST00000102235 | 110 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Igkv3-7-201 | ENSMUST00000103399 | 299 nt | APPRIS P1 BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm26140-201 | ENSMUST00000103807 | 110 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm13329-201 | ENSMUST00000117063 | 265 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Rpl31-ps22-201 | ENSMUST00000117961 | 337 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm14593-201 | ENSMUST00000119948 | 294 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm11704-201 | ENSMUST00000120031 | 214 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm11819-201 | ENSMUST00000122192 | 372 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm14629-201 | ENSMUST00000122428 | 144 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Mir1942-201 | ENSMUST00000157274 | 63 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm24008-201 | ENSMUST00000157733 | 138 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm23641-201 | ENSMUST00000157857 | 101 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm3646-201 | ENSMUST00000171319 | 352 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm22908-201 | ENSMUST00000177620 | 110 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Ang-ps3-201 | ENSMUST00000177964 | 433 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm27445-201 | ENSMUST00000184484 | 72 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm29574-201 | ENSMUST00000186226 | 696 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm28159-201 | ENSMUST00000190296 | 696 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm42439-201 | ENSMUST00000195931 | 486 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Mir7661-201 | ENSMUST00000197023 | 61 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm44960-201 | ENSMUST00000207403 | 141 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm5265-201 | ENSMUST00000076828 | 342 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm22304-201 | ENSMUST00000082688 | 129 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Mir101b-201 | ENSMUST00000083622 | 97 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm23850-201 | ENSMUST00000083830 | 169 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm29674-202 | ENSMUST00000219664 | 4083 nt | TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm2042-201 | ENSMUST00000110145 | 1894 nt | APPRIS P3 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Olfr1105-202 | ENSMUST00000215978 | 3012 nt | APPRIS P1 TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | AC153948.1-201 | ENSMUST00000219080 | 3838 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Olfr1129-202 | ENSMUST00000213315 | 2255 nt | APPRIS P1 TSL 2 BASIC | 3.02 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Olfr1033-202 | ENSMUST00000213865 | 3664 nt | APPRIS P1 TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Lrrd1-201 | ENSMUST00000044039 | 2951 nt | APPRIS P1 TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | AC124562.2-201 | ENSMUST00000223888 | 2313 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Gm3956-201 | ENSMUST00000164882 | 2560 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| Hoxa3 | P02831 | Vmn2r36-201 | ENSMUST00000170402 | 2561 nt | APPRIS P1 TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |