Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.19□□□□□ -2.22
Hmgb3O54879 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.19□□□□□ -2.22
Hmgb3O54879 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.19□□□□□ -2.22
Hmgb3O54879 Gm45730-201ENSMUST00000212560 395 ntBASIC1.19□□□□□ -2.22
Hmgb3O54879 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.19□□□□□ -2.22
Hmgb3O54879 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Hmgb3O54879 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm26396-201ENSMUST00000104093 132 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm22496-201ENSMUST00000104493 88 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm15211-201ENSMUST00000118932 528 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm6587-201ENSMUST00000120219 613 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm14530-201ENSMUST00000122391 333 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm23043-201ENSMUST00000157890 109 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm25035-201ENSMUST00000175414 77 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Snord87-201ENSMUST00000175437 87 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm25175-201ENSMUST00000178712 79 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm21726-201ENSMUST00000179654 392 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Hmgb3O54879 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.18□□□□□ -2.22
Hmgb3O54879 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm22061-201ENSMUST00000082557 107 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm23100-201ENSMUST00000083455 141 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Mir29c-201ENSMUST00000083614 88 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.18□□□□□ -2.22
Hmgb3O54879 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.18□□□□□ -2.22
Hmgb3O54879 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Hmgb3O54879 Mir223-201ENSMUST00000102112 110 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm23381-201ENSMUST00000157676 94 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.17□□□□□ -2.22
Hmgb3O54879 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm17061-201ENSMUST00000163167 499 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm23963-201ENSMUST00000179603 77 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm29657-201ENSMUST00000189807 342 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm8747-201ENSMUST00000195392 751 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Hmgb3O54879 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.17□□□□□ -2.22
Hmgb3O54879 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm25403-201ENSMUST00000082971 143 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.17□□□□□ -2.22
Hmgb3O54879 Gm25541-201ENSMUST00000116888 126 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm14835-201ENSMUST00000119039 315 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm3102-201ENSMUST00000164236 489 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm25243-201ENSMUST00000174912 207 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm27342-201ENSMUST00000183530 109 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm28466-201ENSMUST00000190678 659 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm38238-201ENSMUST00000194334 346 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm42807-201ENSMUST00000200141 329 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Gm18252-203ENSMUST00000215855 757 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Mir322-201ENSMUST00000083484 95 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Mir421-201ENSMUST00000083575 76 ntBASIC1.16□□□□□ -2.22
Hmgb3O54879 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Hmgb3O54879 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm24582-201ENSMUST00000103967 103 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm23109-201ENSMUST00000116867 126 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm13603-201ENSMUST00000119404 83 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm16218-201ENSMUST00000155424 388 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm25981-201ENSMUST00000157921 295 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm23221-201ENSMUST00000158118 93 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Hmgb3O54879 Mir3086-201ENSMUST00000175072 87 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm25730-201ENSMUST00000178753 165 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Mir6997-201ENSMUST00000184313 71 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Mir6352-201ENSMUST00000184495 116 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm18433-201ENSMUST00000192747 197 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm37029-201ENSMUST00000195773 239 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm44128-201ENSMUST00000204909 219 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm29754-201ENSMUST00000206269 358 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.15□□□□□ -2.23
Hmgb3O54879 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm22974-201ENSMUST00000083301 103 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Mir193a-201ENSMUST00000083461 66 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms