Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm14238-201ENSMUST00000120227 323 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm14694-201ENSMUST00000121856 282 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm25621-201ENSMUST00000157223 114 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm26157-201ENSMUST00000158974 126 ntBASIC1.26□□□□□ -2.21
DffaO54786 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
DffaO54786 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
DffaO54786 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.26□□□□□ -2.21
DffaO54786 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
DffaO54786 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.26□□□□□ -2.21
DffaO54786 Gm19457-201ENSMUST00000200995 448 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm44524-201ENSMUST00000203899 271 ntBASIC1.26□□□□□ -2.21
DffaO54786 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.26□□□□□ -2.21
DffaO54786 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.26□□□□□ -2.21
DffaO54786 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm26128-201ENSMUST00000083170 110 ntBASIC1.26□□□□□ -2.21
DffaO54786 Gm23650-201ENSMUST00000083355 70 ntBASIC1.26□□□□□ -2.21
DffaO54786 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
DffaO54786 Gm12393-201ENSMUST00000117084 848 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm14669-201ENSMUST00000118841 250 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm12096-201ENSMUST00000121149 829 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.25□□□□□ -2.21
DffaO54786 Gm23332-201ENSMUST00000157424 275 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm22485-201ENSMUST00000157990 109 ntBASIC1.25□□□□□ -2.21
DffaO54786 Snord11-201ENSMUST00000158468 84 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm24056-201ENSMUST00000158617 146 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm24837-201ENSMUST00000158683 81 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm17061-201ENSMUST00000163167 499 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.25□□□□□ -2.21
DffaO54786 Gm17062-201ENSMUST00000166987 461 ntBASIC1.25□□□□□ -2.21
DffaO54786 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm25035-201ENSMUST00000175414 77 ntBASIC1.25□□□□□ -2.21
DffaO54786 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm24264-201ENSMUST00000179835 94 ntBASIC1.25□□□□□ -2.21
DffaO54786 Gm45530-201ENSMUST00000211658 225 ntBASIC1.25□□□□□ -2.21
DffaO54786 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.25□□□□□ -2.21
DffaO54786 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.25□□□□□ -2.21
DffaO54786 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.25□□□□□ -2.21
DffaO54786 Mir223-201ENSMUST00000102112 110 ntBASIC1.24□□□□□ -2.21
DffaO54786 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.24□□□□□ -2.21
DffaO54786 Gm23011-201ENSMUST00000104148 132 ntBASIC1.24□□□□□ -2.21
DffaO54786 Gm7974-201ENSMUST00000117154 408 ntBASIC1.24□□□□□ -2.21
DffaO54786 Gm14360-201ENSMUST00000120670 393 ntBASIC1.24□□□□□ -2.21
DffaO54786 Gm23429-201ENSMUST00000122486 149 ntBASIC1.24□□□□□ -2.21
DffaO54786 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.24□□□□□ -2.21
DffaO54786 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.24□□□□□ -2.21
DffaO54786 Gm31230-201ENSMUST00000199725 785 ntBASIC1.24□□□□□ -2.21
DffaO54786 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.24□□□□□ -2.21
DffaO54786 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.24□□□□□ -2.21
DffaO54786 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.24□□□□□ -2.21
DffaO54786 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
DffaO54786 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.24□□□□□ -2.21
DffaO54786 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm42736-201ENSMUST00000200723 1353 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm25938-201ENSMUST00000104139 166 ntBASIC1.23□□□□□ -2.21
DffaO54786 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
DffaO54786 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.23□□□□□ -2.21
DffaO54786 Gm27898-201ENSMUST00000183987 80 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.23□□□□□ -2.21
DffaO54786 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.23□□□□□ -2.21
DffaO54786 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.23□□□□□ -2.21
DffaO54786 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm44024-201ENSMUST00000203008 476 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm44050-201ENSMUST00000204263 527 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm18039-201ENSMUST00000217816 728 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm26055-201ENSMUST00000083038 107 ntBASIC1.23□□□□□ -2.21
DffaO54786 Gm25495-201ENSMUST00000104431 131 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm23907-201ENSMUST00000104595 189 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm11845-201ENSMUST00000117886 327 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm15443-201ENSMUST00000118947 820 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm11857-201ENSMUST00000119817 324 ntBASIC1.22□□□□□ -2.21
DffaO54786 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm26349-201ENSMUST00000157530 130 ntBASIC1.22□□□□□ -2.21
DffaO54786 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm19891-201ENSMUST00000189771 303 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm37684-201ENSMUST00000192779 355 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm43510-201ENSMUST00000197922 353 ntBASIC1.22□□□□□ -2.21
DffaO54786 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.22□□□□□ -2.21
DffaO54786 Gm45071-201ENSMUST00000205353 571 ntBASIC1.22□□□□□ -2.21
DffaO54786 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.22□□□□□ -2.21
DffaO54786 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.22□□□□□ -2.21
DffaO54786 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
DffaO54786 Gm12550-201ENSMUST00000118478 329 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm14915-201ENSMUST00000120747 204 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.21□□□□□ -2.22
DffaO54786 Gm22527-201ENSMUST00000158816 106 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm8207-201ENSMUST00000171204 502 ntBASIC1.21□□□□□ -2.22
DffaO54786 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.21□□□□□ -2.22
DffaO54786 Mir3098-201ENSMUST00000175416 87 ntBASIC1.21□□□□□ -2.22
DffaO54786 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
DffaO54786 Gm25936-201ENSMUST00000179952 114 ntBASIC1.21□□□□□ -2.22
DffaO54786 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm28794-201ENSMUST00000185276 136 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm5329-201ENSMUST00000186898 463 ntBASIC1.21□□□□□ -2.22
DffaO54786 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.21□□□□□ -2.22
DffaO54786 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm43402-201ENSMUST00000197159 159 ntBASIC1.21□□□□□ -2.22
DffaO54786 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.21□□□□□ -2.22
DffaO54786 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.21□□□□□ -2.22
DffaO54786 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms