Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm25621-201ENSMUST00000157223 114 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm23120-201ENSMUST00000157654 287 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm23782-201ENSMUST00000157939 120 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Mir3106-201ENSMUST00000175401 82 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm22263-201ENSMUST00000180060 104 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm24415-201ENSMUST00000180218 107 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm27521-201ENSMUST00000184022 64 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Mir8106-201ENSMUST00000184520 139 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm7837-201ENSMUST00000190873 412 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm18433-202ENSMUST00000195682 196 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm19177-201ENSMUST00000204520 613 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm44157-201ENSMUST00000204720 410 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm23136-201ENSMUST00000083425 99 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm25411-201ENSMUST00000083760 151 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm25630-201ENSMUST00000084000 162 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Shisa8J3QNX5 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm13457-201ENSMUST00000117885 267 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm12335-201ENSMUST00000119738 327 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm22561-201ENSMUST00000157331 84 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm22814-201ENSMUST00000157452 104 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm26024-201ENSMUST00000158657 322 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm22532-201ENSMUST00000158822 140 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm38060-201ENSMUST00000194822 464 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm9402-201ENSMUST00000196849 388 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Gm44355-201ENSMUST00000200417 104 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Shisa8J3QNX5 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm14825-201ENSMUST00000113538 701 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm11936-201ENSMUST00000118323 160 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm15002-201ENSMUST00000118406 452 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm13725-201ENSMUST00000122139 207 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm24858-201ENSMUST00000158058 323 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm22840-201ENSMUST00000158444 136 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm26141-201ENSMUST00000175299 126 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm29429-201ENSMUST00000187071 121 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm2719-201ENSMUST00000191929 444 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm43704-201ENSMUST00000196164 496 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm4036-201ENSMUST00000220842 626 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Shisa8J3QNX5 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm22496-201ENSMUST00000104493 88 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm15783-201ENSMUST00000117521 633 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm16242-201ENSMUST00000117741 334 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm11785-201ENSMUST00000120165 601 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm12876-201ENSMUST00000120975 408 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm14298-201ENSMUST00000139032 237 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm16356-201ENSMUST00000143300 169 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm27592-201ENSMUST00000157729 126 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm10357-201ENSMUST00000159886 264 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm22174-201ENSMUST00000175050 125 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm22692-201ENSMUST00000175055 125 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm27634-201ENSMUST00000175060 126 ntBASIC2.92□□□□□ -1.94
Shisa8J3QNX5 Gm22460-201ENSMUST00000175269 124 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms