Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm24960-201ENSMUST00000157923 90 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm27342-201ENSMUST00000183530 109 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm27861-201ENSMUST00000183920 214 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm43284-201ENSMUST00000200103 253 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm44554-201ENSMUST00000208738 147 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm25126-201ENSMUST00000083343 102 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Mir10b-201ENSMUST00000083566 68 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.58□□□□□ -2.16
Chd3B1AR17 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm17162-201ENSMUST00000168538 473 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm37993-201ENSMUST00000195301 988 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm43708-201ENSMUST00000198857 961 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm22740-201ENSMUST00000083439 109 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Chd3B1AR17 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm25416-201ENSMUST00000104221 107 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm44052-201ENSMUST00000203382 396 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm44137-201ENSMUST00000203670 367 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Gm46193-201ENSMUST00000219399 364 ntBASIC1.57□□□□□ -2.16
Chd3B1AR17 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Chd3B1AR17 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm14657-201ENSMUST00000117461 302 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm25621-201ENSMUST00000157223 114 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm24222-201ENSMUST00000158834 93 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm26195-201ENSMUST00000175035 101 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm22565-201ENSMUST00000175540 69 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Mir7241-201ENSMUST00000184532 64 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 CT030684.2-201ENSMUST00000228946 826 ntBASIC1.56□□□□□ -2.16
Chd3B1AR17 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Chd3B1AR17 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Chd3B1AR17 Gm14868-201ENSMUST00000117840 216 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm14049-201ENSMUST00000121009 636 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm15279-201ENSMUST00000155593 288 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Chd3B1AR17 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm42976-201ENSMUST00000200313 222 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.55□□□□□ -2.16
Chd3B1AR17 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Mir208a-201ENSMUST00000083498 83 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm14731-201ENSMUST00000119216 376 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm25658-201ENSMUST00000158472 128 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm22945-201ENSMUST00000158557 157 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Mir5129-201ENSMUST00000174938 78 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Mir6950-201ENSMUST00000184438 73 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm43723-201ENSMUST00000196886 189 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Trdv3-201ENSMUST00000198551 309 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm45386-201ENSMUST00000210194 218 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm18252-203ENSMUST00000215855 757 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Chd3B1AR17 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Gm22575-201ENSMUST00000082981 110 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Mir320-201ENSMUST00000083594 82 ntBASIC1.55□□□□□ -2.16
Chd3B1AR17 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.55□□□□□ -2.16
Chd3B1AR17 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Chd3B1AR17 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Chd3B1AR17 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Chd3B1AR17 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms