Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm25421-201ENSMUST00000104218 164 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm22767-201ENSMUST00000158365 165 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm22531-201ENSMUST00000158819 140 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm27220-201ENSMUST00000183453 262 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm43220-201ENSMUST00000199299 282 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm46993-201ENSMUST00000220708 259 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm5548-201ENSMUST00000055878 397 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm24966-201ENSMUST00000082443 79 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Mir202-201ENSMUST00000083568 72 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Mir215-201ENSMUST00000083628 112 ntBASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Ccdc9bA3KGF9 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.9□□□□□ -1.78
Ccdc9bA3KGF9 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ccdc9bA3KGF9 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm25169-201ENSMUST00000104190 129 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Mir1b-201ENSMUST00000117012 122 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm23990-201ENSMUST00000117031 117 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm14803-201ENSMUST00000117163 361 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm26187-201ENSMUST00000157693 101 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm24998-201ENSMUST00000157908 89 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm22968-201ENSMUST00000157955 118 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm28825-201ENSMUST00000186233 238 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm23370-202ENSMUST00000197008 129 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm43680-201ENSMUST00000199466 340 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm8820-201ENSMUST00000204077 571 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm36189-201ENSMUST00000204113 523 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm45392-201ENSMUST00000210441 214 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Gm25930-201ENSMUST00000082785 107 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc9bA3KGF9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Mir466p-201ENSMUST00000103925 89 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm24982-201ENSMUST00000104456 132 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm15926-201ENSMUST00000120492 550 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm14303-201ENSMUST00000121320 171 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm13419-201ENSMUST00000121711 271 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm10059-201ENSMUST00000131139 171 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm13249-201ENSMUST00000177803 345 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm13144-201ENSMUST00000179385 345 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm43649-201ENSMUST00000196596 391 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Mir129b-201ENSMUST00000197461 65 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm43814-201ENSMUST00000197851 413 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm45778-201ENSMUST00000211959 153 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc9bA3KGF9 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Gm23584-201ENSMUST00000157655 129 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Gm22316-201ENSMUST00000158012 216 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Gm24676-201ENSMUST00000158758 75 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Mir6371-201ENSMUST00000184470 111 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.88□□□□□ -1.79
Ccdc9bA3KGF9 Snord21-201ENSMUST00000082519 94 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms