Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir3096-201ENSMUST00000116685 71 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Snord13-201ENSMUST00000157627 104 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm22483-201ENSMUST00000157986 274 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm23180-201ENSMUST00000158686 125 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm24813-201ENSMUST00000175310 84 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm23933-201ENSMUST00000178405 79 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm37002-201ENSMUST00000194560 373 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm18546-201ENSMUST00000197245 676 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm43979-201ENSMUST00000203179 475 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 AC134254.4-201ENSMUST00000223086 370 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm22779-201ENSMUST00000104085 107 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Mdga2-203ENSMUST00000113942 423 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm13087-201ENSMUST00000118298 256 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm23559-201ENSMUST00000157824 103 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm29263-201ENSMUST00000188718 463 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm28384-201ENSMUST00000189079 463 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm37801-201ENSMUST00000194754 274 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm9318-201ENSMUST00000222444 438 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Col6a4A2AX52 Mir137-201ENSMUST00000083635 73 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm24381-201ENSMUST00000122697 104 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm25621-201ENSMUST00000157223 114 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm27265-201ENSMUST00000183559 77 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm37743-201ENSMUST00000194645 376 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm43978-201ENSMUST00000203491 451 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm12313-201ENSMUST00000121347 421 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm22963-201ENSMUST00000157960 91 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm29641-201ENSMUST00000188955 259 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Gm3724-201ENSMUST00000197957 349 ntBASIC0.92□□□□□ -2.26
Col6a4A2AX52 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col6a4A2AX52 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm16431-201ENSMUST00000117454 431 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm13454-201ENSMUST00000118166 483 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm12640-201ENSMUST00000120097 310 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm15112-201ENSMUST00000120152 860 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm24552-201ENSMUST00000158646 103 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm7329-201ENSMUST00000185915 210 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm44818-201ENSMUST00000206608 358 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.91□□□□□ -2.26
Col6a4A2AX52 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
Col6a4A2AX52 Gm13577-201ENSMUST00000121365 205 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm14411-201ENSMUST00000121798 914 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm24716-201ENSMUST00000157524 104 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm23151-201ENSMUST00000178061 107 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm24925-201ENSMUST00000178157 107 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Mir141-201ENSMUST00000083540 72 ntBASIC0.9□□□□□ -2.26
Col6a4A2AX52 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
Col6a4A2AX52 Gm25992-201ENSMUST00000102437 109 ntBASIC0.9□□□□□ -2.27
Col6a4A2AX52 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Col6a4A2AX52 Gm15110-201ENSMUST00000117545 881 ntBASIC0.9□□□□□ -2.27
Col6a4A2AX52 Gm15113-201ENSMUST00000119280 836 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 525.7 ms