Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm35843-201ENSMUST00000193716 666 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm37002-201ENSMUST00000194560 373 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm36728-201ENSMUST00000195782 665 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm45530-201ENSMUST00000211658 225 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm18039-201ENSMUST00000217816 728 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm19441-201ENSMUST00000221545 330 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 AC166358.6-201ENSMUST00000221834 1206 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 CT571268.1-201ENSMUST00000222320 407 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 AC109172.1-201ENSMUST00000227503 187 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm22299-201ENSMUST00000082663 136 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm25632-201ENSMUST00000083112 85 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Mir429-201ENSMUST00000083493 83 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm14530-201ENSMUST00000122391 333 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm16129-201ENSMUST00000152628 486 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm23670-201ENSMUST00000157469 119 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm26348-201ENSMUST00000157528 240 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm23558-201ENSMUST00000157823 80 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm29460-201ENSMUST00000188607 714 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm37743-201ENSMUST00000194645 376 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm42960-201ENSMUST00000202160 241 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Gm44865-201ENSMUST00000207240 531 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Mir323-201ENSMUST00000083683 86 ntBASIC0.85□□□□□ -2.27
Trav3-4A0A075B654 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm22779-201ENSMUST00000104085 107 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm22091-201ENSMUST00000116908 127 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm13885-201ENSMUST00000117569 187 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm22611-201ENSMUST00000158288 150 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Mir8119-201ENSMUST00000183371 129 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Mir7k-201ENSMUST00000184115 110 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm43493-201ENSMUST00000199837 202 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm44564-201ENSMUST00000207985 180 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm46312-201ENSMUST00000220961 420 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm22980-201ENSMUST00000082608 70 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Mir148b-201ENSMUST00000083626 97 ntBASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trav3-4A0A075B654 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Trav3-4A0A075B654 Gm24982-201ENSMUST00000104456 132 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm2003-201ENSMUST00000118537 636 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm12156-201ENSMUST00000119188 554 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm14716-201ENSMUST00000120138 718 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm14215-201ENSMUST00000120578 221 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm22718-201ENSMUST00000122701 315 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm22485-201ENSMUST00000157990 109 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm2855-201ENSMUST00000166765 456 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm45366-201ENSMUST00000209828 384 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm26175-201ENSMUST00000083794 131 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm25683-201ENSMUST00000083940 131 ntBASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trav3-4A0A075B654 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm14879-201ENSMUST00000117308 507 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm7429-201ENSMUST00000118664 348 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm12417-201ENSMUST00000119153 403 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm24627-201ENSMUST00000122764 138 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm22452-201ENSMUST00000122804 104 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm26349-201ENSMUST00000157530 130 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm23124-201ENSMUST00000157650 107 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm25888-201ENSMUST00000157778 302 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm24419-201ENSMUST00000157875 332 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Mir7679-201ENSMUST00000183379 63 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm20118-201ENSMUST00000187207 162 ntBASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav3-4A0A075B654 Gm45268-201ENSMUST00000210046 370 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms